From ceb64d9cb7403624eb5f004090b9f2892ff1ebfa Mon Sep 17 00:00:00 2001
From: danielnachun <daniel.nachun@gmail.com>
Date: Mon, 18 Sep 2023 16:24:56 -0700
Subject: [PATCH] add apex

---
 container/apex/apex.yml | 29 +++++++++++++++++++++++++++++
 1 file changed, 29 insertions(+)
 create mode 100644 container/apex/apex.yml

diff --git a/container/apex/apex.yml b/container/apex/apex.yml
new file mode 100644
index 000000000..8ba66a2ff
--- /dev/null
+++ b/container/apex/apex.yml
@@ -0,0 +1,29 @@
+name: apex
+channels:
+  - dnachun
+  - conda-forge
+  - bioconda
+  - nodefaults
+dependencies:
+  - apex=0.2-alpha
+  - htslib
+  - bcftools=1.17
+  - rpy2
+  - altair
+  - pytables
+  - numpy
+  - matplotlib
+  - scikit-learn
+  - openpyxl
+  - statsmodels
+  - ptpython
+  - formulaic
+  - jupyterlab
+  - ipykernel
+  - r-tidyverse
+  - r-irkernel
+  - seaborn
+  - bash_kernel
+  - plotnine
+  - pandas
+  - scipy