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WebMol: 3D Protein Viewer

Link to Project

http://cvdlab-bio.github.com/webmol/

Introduction

WebMol is a 3D Protein Viewer developed in HTML5 and Javascript with the support of PhiloGL (3D WebGL Framework). The application is designed to be accessible from Internet and it's compatible with the JSON format of protein provided by the project WebPdb. It can download the required proteins via a REST interface provided by WebPdb.

Features

  • 3D Rendering and Custom Optimization:
    • Frustum Culling
    • Dynamic Quality of objects dependent on distance
    • Pseudo-Instancing of objects
  • Navigation of the scene:
    • Zoom in and Zoom out
    • Panoramic navigation
    • Camera Rotation
    • Reset camera to initial position
    • Atoms are pickable to show informations
  • Background color can be chosed
  • JSON Downloader and Parser to view more protein as possible and integrate WebPdb Project.

Viewer Type

  • Ball and stick
  • Stick
  • Van der Waals Spheres
  • Lines
  • Backbone (alone or superimposed)

Development Team

  • Antonio Gallo
  • Daniele D'Andrea
  • Federico Dell'Osso
  • Luca Insola
  • Marcin Kwiatkowski