{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":831935969,"defaultBranch":"main","name":"gato","ownerLogin":"dacarlin","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2024-07-22T02:47:59.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/6118414?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1722044655.0","currentOid":""},"activityList":{"items":[{"before":"408be1bfaa6e9a8d163eea2f92d3f22562835164","after":"77b793b744f1b55d39fb6e2207dba150281e2f8a","ref":"refs/heads/main","pushedAt":"2024-08-02T05:03:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"8eb015c4b75b1b0da13422c51ce821c31e01115d","after":"408be1bfaa6e9a8d163eea2f92d3f22562835164","ref":"refs/heads/main","pushedAt":"2024-08-02T05:02:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"122164a0aa2874fe3d06282b707f82239b2627cb","after":"8eb015c4b75b1b0da13422c51ce821c31e01115d","ref":"refs/heads/main","pushedAt":"2024-08-02T04:54:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Delete train_cuda.py","shortMessageHtmlLink":"Delete train_cuda.py"}},{"before":"42ce5dc770c33c0f5c0dbdf24aa42b0597a2b579","after":"122164a0aa2874fe3d06282b707f82239b2627cb","ref":"refs/heads/main","pushedAt":"2024-08-02T04:53:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"10ee575a264fe47d9c7413daed77fe0c3f8e7217","after":"42ce5dc770c33c0f5c0dbdf24aa42b0597a2b579","ref":"refs/heads/main","pushedAt":"2024-08-02T04:41:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Fix typos in README","shortMessageHtmlLink":"Fix typos in README"}},{"before":"6982b43dd7d04398b378f8e2aa69235d2dff35f1","after":"10ee575a264fe47d9c7413daed77fe0c3f8e7217","ref":"refs/heads/main","pushedAt":"2024-08-02T03:12:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Update readme","shortMessageHtmlLink":"Update readme"}},{"before":"15e863a93f46bd25014a67a15ac012e0b5c9138a","after":"6982b43dd7d04398b378f8e2aa69235d2dff35f1","ref":"refs/heads/main","pushedAt":"2024-08-01T04:33:27.000Z","pushType":"pr_merge","commitsCount":7,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Merge pull request #1 from dacarlin/all-backbone-features\n\nAll backbone features","shortMessageHtmlLink":"Merge pull request #1 from dacarlin/all-backbone-features"}},{"before":"ecb40f5b437963c76c716ed925295c82f40e70d8","after":"c3d230fa2d1b510830cdef8252949639825d1577","ref":"refs/heads/all-backbone-features","pushedAt":"2024-08-01T03:18:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Clean up code for clarity","shortMessageHtmlLink":"Clean up code for clarity"}},{"before":"1f182eb09c3fe198c58da2d95a4397e1ba86172c","after":"ecb40f5b437963c76c716ed925295c82f40e70d8","ref":"refs/heads/all-backbone-features","pushedAt":"2024-07-28T01:31:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Clean up code, prepare for k=32 training run","shortMessageHtmlLink":"Clean up code, prepare for k=32 training run"}},{"before":"c0bd84b82db8340355e1d89657b02a72fef28705","after":"1f182eb09c3fe198c58da2d95a4397e1ba86172c","ref":"refs/heads/all-backbone-features","pushedAt":"2024-07-28T01:17:48.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Update scripts for training all-by-all backbone model","shortMessageHtmlLink":"Update scripts for training all-by-all backbone model"}},{"before":"31cb6f5cf9b9c31b2521b96d1aea295c23e58642","after":"c0bd84b82db8340355e1d89657b02a72fef28705","ref":"refs/heads/all-backbone-features","pushedAt":"2024-07-27T02:36:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Clean up code for clarity","shortMessageHtmlLink":"Clean up code for clarity"}},{"before":"12e86d6e507a004e96d2897b88da2d2d4c3a5fa8","after":"31cb6f5cf9b9c31b2521b96d1aea295c23e58642","ref":"refs/heads/all-backbone-features","pushedAt":"2024-07-27T02:07:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Rough implementation of all-to-all backbone atom distance features","shortMessageHtmlLink":"Rough implementation of all-to-all backbone atom distance features"}},{"before":null,"after":"12e86d6e507a004e96d2897b88da2d2d4c3a5fa8","ref":"refs/heads/all-backbone-features","pushedAt":"2024-07-27T01:44:15.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Update scripts for training all-backbone model","shortMessageHtmlLink":"Update scripts for training all-backbone model"}},{"before":"a88976a5df6e519e5ba4869f51a3a08aa8f03a7c","after":"15e863a93f46bd25014a67a15ac012e0b5c9138a","ref":"refs/heads/main","pushedAt":"2024-07-26T05:35:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Add script for fetching raw data","shortMessageHtmlLink":"Add script for fetching raw data"}},{"before":"e70a9bc9081a6dc00c16cbd4eed6cb279b55eb1e","after":"a88976a5df6e519e5ba4869f51a3a08aa8f03a7c","ref":"refs/heads/main","pushedAt":"2024-07-26T05:33:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Add notes for implementing RBF-encoded distances for all backbone atoms\n(not just CA)","shortMessageHtmlLink":"Add notes for implementing RBF-encoded distances for all backbone atoms"}},{"before":"27ae0e57de18d85bffbdbd87e5ba7200c4f162bd","after":"e70a9bc9081a6dc00c16cbd4eed6cb279b55eb1e","ref":"refs/heads/main","pushedAt":"2024-07-26T03:58:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Add in benchmark perplexities from Ingraham and ProteinMPNN","shortMessageHtmlLink":"Add in benchmark perplexities from Ingraham and ProteinMPNN"}},{"before":"d99970a87c062ed36a7d6107d920e2f3f441097d","after":"27ae0e57de18d85bffbdbd87e5ba7200c4f162bd","ref":"refs/heads/main","pushedAt":"2024-07-26T02:44:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Update code structure docs","shortMessageHtmlLink":"Update code structure docs"}},{"before":"a46cc19ce2d8a23e4609297593bdd57f8e027e46","after":"d99970a87c062ed36a7d6107d920e2f3f441097d","ref":"refs/heads/main","pushedAt":"2024-07-26T02:32:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Update docs in data loaders","shortMessageHtmlLink":"Update docs in data loaders"}},{"before":"fcbc9ec5f97f09e8a4e220c5c5fd025e22481d22","after":"a46cc19ce2d8a23e4609297593bdd57f8e027e46","ref":"refs/heads/main","pushedAt":"2024-07-26T01:35:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Save PDB file name in graph data structure for later analysis","shortMessageHtmlLink":"Save PDB file name in graph data structure for later analysis"}},{"before":"ac859a43aaae3d75281bc0a1ae0b56433118a8e8","after":"fcbc9ec5f97f09e8a4e220c5c5fd025e22481d22","ref":"refs/heads/main","pushedAt":"2024-07-22T07:11:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Begin moving params to argparse","shortMessageHtmlLink":"Begin moving params to argparse"}},{"before":"b9192a9127df497d555da083525e8735cf4bad88","after":"ac859a43aaae3d75281bc0a1ae0b56433118a8e8","ref":"refs/heads/main","pushedAt":"2024-07-22T03:10:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Break up implementation into modules","shortMessageHtmlLink":"Break up implementation into modules"}},{"before":null,"after":"b9192a9127df497d555da083525e8735cf4bad88","ref":"refs/heads/main","pushedAt":"2024-07-22T02:56:43.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dacarlin","name":"Alex Carlin","path":"/dacarlin","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6118414?s=80&v=4"},"commit":{"message":"Add README describing the Gato project","shortMessageHtmlLink":"Add README describing the Gato project"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOC0wMlQwNTowMzozMi4wMDAwMDBazwAAAASPzj7N","startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOC0wMlQwNTowMzozMi4wMDAwMDBazwAAAASPzj7N","endCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wNy0yMlQwMjo1Njo0My4wMDAwMDBazwAAAASFU4DR"}},"title":"Activity ยท dacarlin/gato"}