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docs: Add note about full documentation
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jvfe committed Aug 21, 2024
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Expand Up @@ -93,6 +93,7 @@ nextflow run dalmolingroup/euryale \
-entry download \
-profile <docker/singularity/podman/shifter/charliecloud/conda/institute>
```
Check out the full documentation for a full list of [EURYALE's download parameters](https://dalmolingroup.github.io/euryale/params/#download-entry).
In case you download the Kraken2 database (`--download_kraken`), make sure to extract it using the following command before using
it in the pipeline:

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