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add dbxrefs to NISO URLs #131

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add dbxrefs to NISO URLs #131

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nicolevasilevsky
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@nicolevasilevsky nicolevasilevsky commented Aug 9, 2022

close #130

@marijane I added the NISO URLs as hasDbxref

The casrai links are dead, should we just delete those? And let me know if you think the NISO links should be definition sources instead of dbxrefs (or in addition to?)

cc @kristiholmes @mellybelly

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@marijane marijane left a comment

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I have thoughts.

  1. I think we should use IAO_0000119 and not hasDbXref, because we're already using hasDbXref for the unique ID numbers for each CrediT term. (I imagine these numbers haven't changed, but we might double-check the new NISO pages to be sure.)
  2. We definitely should remove references to casrai.org.
  3. If we edit the main CRO OWL file directly like this, we're effectively abandoning the ODK-based process we created this ontology with. Recall that we did our own OWL implementation of CrediT at https://github.com/data2health/credit-ontology and created an imports file to pull in those definitions. Technically, we should update that ontology and re-do the imports. That said, I have no idea how difficult that might be, given that the ODK and it supporting tools like ROBOT have changed a lot since we last used them.
  4. Even if we abandon the ODK for CRO, we should probably update credit-ontology too. Maybe we should ask VincentML about this in their ticket.

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action items:

  • wait for Vincent to respond about NISO adopting credit ontology
  • NV: update the 'definition source’ to point to the credit URLs in credit-edit.owl (wait a few days to hear back from Vincent)
  • NV: remove references to casrai.org on this PR
  • decide later if we want to reimport credit.owl into cro.owl. If not, I should do item 1 on Marijane's list above.

@nicolevasilevsky nicolevasilevsky marked this pull request as draft August 16, 2022 23:44
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NISO identifiers for CRediT roles
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