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ncbi taxonomy data cleaning #1014

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ncbi taxonomy data cleaning #1014

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Commits on Apr 22, 2024

  1. ncbi taxonomy data cleaning scripts and unittest

    @krishnaswamypradeep
    krishnaswamypradeep committed Apr 22, 2024
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  2. fixed format issues

    @krishnaswamypradeep
    krishnaswamypradeep committed Apr 22, 2024
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Commits on Jun 24, 2024

  1. Merge branch 'master' into ncbi_taxonomy

    @spiekos
    spiekos authored Jun 24, 2024
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Commits on Jun 25, 2024

  1. Update README.md 

    fill in missing subsections
    @spiekos
    spiekos authored Jun 25, 2024
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  2. Update README.md 

    add schema documentation on edges
    @spiekos
    spiekos authored Jun 25, 2024
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Commits on Jul 4, 2024

  1. Update format_ncbi_taxonomy_test.py 

    update script
    @spiekos
    spiekos authored Jul 4, 2024
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  2. Update tests.sh 

    add json tool test
    @spiekos
    spiekos authored Jul 4, 2024
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  3. Update README.md 

    Add documentation around new schema added as part of this import
    @spiekos
    spiekos authored Jul 4, 2024
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  4. Rename ncbi_taxonomy_schema.mcf to ncbi_taxonomy_schema.mcf 

    Fix typo in subdirectory name
    @spiekos
    spiekos authored Jul 4, 2024
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  5. Update README.md 

    add missing enumeration generated by script to the appropriate subsection of the New Schema section
    @spiekos
    spiekos authored Jul 4, 2024
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  6. Update format_ncbi_taxonomy.py 

    add quotes around name for generated enum
    @spiekos
    spiekos authored Jul 4, 2024
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  7. Update format_ncbi_taxonomy_test.py 

    revert back to original test script
    @spiekos
    spiekos authored Jul 4, 2024
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Commits on Jul 6, 2024

  1. Update ncbi_taxonomy.tmcf

    @spiekos
    spiekos authored Jul 6, 2024
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Commits on Jul 22, 2024

  1. Update format_ncbi_taxonomy.py

    @spiekos
    spiekos authored Jul 22, 2024
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  2. Update ncbi_taxonomy.tmcf

    @spiekos
    spiekos authored Jul 22, 2024
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  3. Update README.md

    @spiekos
    spiekos authored Jul 22, 2024
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  4. Update README.md

    @spiekos
    spiekos authored Jul 22, 2024
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Commits on Sep 3, 2024

  1. NCBI Taxonomy git comments fix

    @krishnaswamypradeep
    krishnaswamypradeep committed Sep 3, 2024
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  2. type fix in README.md file

    @krishnaswamypradeep
    krishnaswamypradeep committed Sep 3, 2024
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Commits on Sep 4, 2024

  1. Merge branch 'master' into ncbi_taxonomy

    @hareesh-ms
    hareesh-ms authored Sep 4, 2024
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Commits on Oct 3, 2024

  1. Merge branch 'datacommonsorg:master' into ncbi_taxonomy

    @krishnaswamypradeep
    krishnaswamypradeep authored Oct 3, 2024
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  2. lint issue fix

    @krishnaswamypradeep
    krishnaswamypradeep committed Oct 3, 2024
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Commits on Oct 22, 2024

  1. Merge branch 'master' into ncbi_taxonomy

    @spiekos
    spiekos authored Oct 22, 2024
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Commits on Oct 29, 2024

  1. Update README.md 

    update the properties subsection to describe all properties included in the import
    @spiekos
    spiekos authored Oct 29, 2024
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  2. Update README.md 

    update notes and caveat subsection
    @spiekos
    spiekos authored Oct 29, 2024
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