update to python3?

[ekg]

Would it be possible to move to python3? What tools require python2.7?

[diekhans]

Hi Erik, These tools haven't been maintained in years. If VG needs them, probably best to fork into a CGL-owned repo and go from there.

[ekg]

MAF is the only creature in the uncanny valley between genome graphs and MSAs. Are there really just a handful of people using MAF?

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On Fri, Apr 10, 2020, 15:50 Mark Diekhans ***@***.***> wrote: Hi Erik, These tools haven't been maintained in years. If VG needs them, probably best to fork into a CGL-owned repo and go from there. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#24 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AABDQEJAGUNJL3DIGGSD6V3RL4PZLANCNFSM4MFLGDWA> .

[diekhans]

People build UCSC browser hubs and some tools, like PhyloCSF, use it. so I don't know how many, but more than either genome graphs or HAL ;-) Erik Garrison <notifications@github.com> writes:

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MAF is the only creature in the uncanny valley between genome graphs and MSAs. Are there really just a handful of people using MAF?