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Sandbox image upgrade #552

Merged
merged 27 commits into from
Oct 17, 2024
Merged

Sandbox image upgrade #552

merged 27 commits into from
Oct 17, 2024

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vikineema
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Proposed changes

Update tools and notebooks due to upgraded packages in sandbox image upgrade

Checklist (replace [ ] with [x] to check off)

  • Remove any unused Python packages from Load packages
  • Remove any unused/empty code cells
  • Remove any guidance cells (e.g. General advice)
  • Ensure that all code cells follow the PEP8 standard for code. The jupyterlab_code_formatter tool can be used to format code cells to a consistent style: select each code cell, then click Edit and then one of the Apply X Formatter options (YAPF or Black are recommended)
  • Include relevant tags in the first notebook cell and re-use tags if possible
  • Ensure appropriate colour schemes have been used to maximise accessibility for vision impairment. Test your images or learn more with Coblis or TPGI
  • Clear all outputs, run notebook from start to finish, and save the notebook in the state where all cells have been sequentially evaluated

vikineema and others added 27 commits September 30, 2024 20:43
@vikineema
Remove manual setting of variable USE_PYGEOS
cae020d
@vikineema
Bump version
d5d1e21
@vikineema
Remove flake8 constraint
c30c534
@vikineema
Fix ValueError in subpixel_contours
f3a17ba
@vikineema
Update build system dependencies
fe52655
@vikineema
Set crop default to False
14b91ad
@vikineema
Bump version
3cb5b4d
@vikineema
Merge branch 'model_tides' of github.com:digitalearthafrica/deafrica-…
cb25d8e 
…sandbox-notebooks into sandbox-image-upgrade
@vikineema
Update setuptools requirement
82f1d03
@vikineema
Fix apps not available in 2.5.1
81248f6
@vikineema
Merge branch 'fix-apps' of https://github.com/digitalearthafrica/deaf…
83e7960 
…rica-sandbox-notebooks into sandbox-image-upgrade
@vikineema
Fix RecursionError in Intertidal_elevation notebook
c2b3bea
@vikineema
Update Change_filmstrips notebook
c05f3a5
@vikineema
Merge branch 'sandbox-image-upgrade' of https://github.com/digitalear…
dc23053 
…thafrica/deafrica-sandbox-notebooks into sandbox-image-upgrade
@vikineema
Fix recursion error
adf804c
@vikineema
Fix crop parameter
672bb93
@vikineema
Update window size for lee filter
763d9ee
@vikineema
Regenerate model file
5b7ed02
@vikineema
Update phenology plotting
a30c980
@vikineema
Bump version
f0a8b54
@vikineema
Merge branch 'sandbox-image-upgrade' of github.com:digitalearthafrica…
ccf1e49 
…/deafrica-sandbox-notebooks into sandbox-image-upgrade
@vikineema
Merge branch 'main' of github.com:digitalearthafrica/deafrica-sandbox…
a31e6ef 
…-notebooks into sandbox-image-upgrade
@vikineema
Update readme for tools
a02706b
@vikineema
Update conda environment file to match sandbox upgrade
8495835
@vikineema
Update python version for precommit
e54dee6
@vikineema
Fix parallel_apply
53b42a1
@vikineema
Remove environment variable USE_PYGEOS
bd560c9
@vikineema vikineema requested a review from mickwelli October 15, 2024 21:40
mickwelli
mickwelli approved these changes Oct 15, 2024
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@mickwelli mickwelli left a comment

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Thanks @vikineema. Looks good, I guess this will be tested in dev? We'll hold on the upgrade due to training this week.

@vikineema vikineema merged commit 4524ecc into main Oct 17, 2024
1 check passed
@vikineema vikineema deleted the sandbox-image-upgrade branch October 17, 2024 07:10
nanaboamah89 pushed a commit that referenced this pull request Nov 13, 2024
@vikineema
Sandbox image upgrade (#552)
b90b974 
* Remove manual setting of variable USE_PYGEOS

* Bump version

* Remove flake8 constraint

* Fix ValueError in subpixel_contours

* Update build system dependencies

* Set crop default to False

* Bump version

* Update setuptools requirement

* Fix apps not available in 2.5.1

* Fix RecursionError in Intertidal_elevation notebook

* Update Change_filmstrips notebook

* Fix recursion error

* Fix crop parameter

* Update window size for lee filter

* Regenerate model file

* Update phenology plotting

* Bump version

* Update readme for tools

* Update conda environment file to match sandbox upgrade

* Update python version for precommit

* Fix parallel_apply

* Remove environment variable USE_PYGEOS
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@mickwelli mickwelli mickwelli approved these changes

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@vikineema @mickwelli