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| # Readers | ||
| # Data | ||
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| | **Reader** | **Data Unit** | **Order** | **Class** | **Observations** | | ||
| |-------------------- |----------------------------------------------------------------------------------- |--------------------- |-------------------------------------------------------------- |------------------------------------------------------------------------------------------------------------------------------------ | | ||
| | PNGReader | Each unit of data is a image file (PNG) inside the root folder | Lexigraphical order | minerva.data.readers.png_reader.PNGReader | File extensions: .png | | ||
| | TIFFReader | Each unit of data is a image file (TIFF) inside the root folder | Lexigraphical order | minerva.data.readers.tiff_reader.TiffReader | File extensions: .tif and .tiff | | ||
| | TabularReader | Each unit of data is the i-th row in a dataframe, with columns filtered | Dataframe rows | minerva.data.readers.tabular_reader.TabularReader | Support pandas dataframe | | ||
| | CSVReader | Each unit of data is the i-th row in a CSV file, with columns filtered | CSV Rowd | minerva.data.readers.csv_reader.CSVReader | If dataframe is already open, use TabularReader instead. This class will open and load the CSV file and pass it to a TabularReader | | ||
| | PatchedArrayReader | Each unit of data is a submatrix of specified shape inside an n-dimensional array | Dimension order | minerva.data.readers.patched_array_reader.PatchedArrayReader | Supports any data with ndarray protocol (tensor, xarray, zarr) | | ||
| | PatchedZarrReader | Each unit of data is a submatrix of specified shape inside an Zarr Array | Dimension order | minerva.data.readers.zarr_reader.ZarrArrayReader | Open zarr file in lazy mode and pass it to PatchedArrayReader | | ||
| ## Readers | ||
|
|
||
| | **Reader** | **Data Unit** | **Order** | **Class** | **Observations** | | ||
| | :----------------- | ---------------------------------------------------------------------------------- | :-------------------: | :----------------: | ----------------------------------------------------------------------------------------------------------------------------------- | | ||
| | PNGReader | Each unit of data is a image file (PNG) inside the root folder | Lexicographical order | PNGReader | File extensions: .png | | ||
| | TIFFReader | Each unit of data is a image file (TIFF) inside the root folder | Lexicographical order | TiffReader | File extensions: .tif and .tiff | | ||
| | TabularReader | Each unit of data is the i-th row in a dataframe, with columns filtered | Dataframe rows | TabularReader | Support pandas dataframe | | ||
| | CSVReader | Each unit of data is the i-th row in a CSV file, with columns filtered | CSV Rowd | CSVReader | If data frame is already open, use TabularReader instead. This class will open and load the CSV file and pass it to a TabularReader | | ||
| | PatchedArrayReader | Each unit of data is a sub matrix of specified shape inside an n-dimensional array | Dimension order | PatchedArrayReader | Supports any data with ndarray protocol (tensor, xarray, zarr) | | ||
| | PatchedZarrReader | Each unit of data is a sub matrix of specified shape inside an Zarr Array | Dimension order | ZarrArrayReader | Open zarr file in lazy mode and pass it to PatchedArrayReader | |