Update webservice tag and fix sonarcloud warnings

THIRD-PARTY-LICENSES.txt

@@ -131,10 +131,10 @@ Lists of 417 third-party dependencies.
      (The Apache Software License, Version 2.0) docker-java-core (com.github.docker-java:docker-java-core:3.3.0 - https://github.com/docker-java/docker-java)
      (The Apache Software License, Version 2.0) docker-java-transport (com.github.docker-java:docker-java-transport:3.3.0 - https://github.com/docker-java/docker-java)
      (The Apache Software License, Version 2.0) docker-java-transport-httpclient5 (com.github.docker-java:docker-java-transport-httpclient5:3.3.0 - https://github.com/docker-java/docker-java)
-     (Apache Software License, Version 2.0) dockstore-common (io.dockstore:dockstore-common:1.15.0-SNAPSHOT - no url defined)
-     (Apache Software License, Version 2.0) dockstore-integration-testing (io.dockstore:dockstore-integration-testing:1.15.0-SNAPSHOT - no url defined)
-     (Apache Software License, Version 2.0) dockstore-language-plugin-parent (io.dockstore:dockstore-language-plugin-parent:1.15.0-SNAPSHOT - no url defined)
-     (Apache Software License, Version 2.0) dockstore-webservice (io.dockstore:dockstore-webservice:1.15.0-SNAPSHOT - no url defined)
+     (Apache Software License, Version 2.0) dockstore-common (io.dockstore:dockstore-common:1.15.0-alpha.13 - no url defined)
+     (Apache Software License, Version 2.0) dockstore-integration-testing (io.dockstore:dockstore-integration-testing:1.15.0-alpha.13 - no url defined)
+     (Apache Software License, Version 2.0) dockstore-language-plugin-parent (io.dockstore:dockstore-language-plugin-parent:1.15.0-alpha.13 - no url defined)
+     (Apache Software License, Version 2.0) dockstore-webservice (io.dockstore:dockstore-webservice:1.15.0-alpha.13 - no url defined)
      (Apache License 2.0) Dropwizard (io.dropwizard:dropwizard-core:4.0.2 - http://www.dropwizard.io/4.0.2/dropwizard-bom/dropwizard-dependencies/dropwizard-parent/dropwizard-core)
      (Apache License 2.0) Dropwizard Asset Bundle (io.dropwizard:dropwizard-assets:4.0.2 - http://www.dropwizard.io/4.0.2/dropwizard-bom/dropwizard-dependencies/dropwizard-parent/dropwizard-assets)
      (Apache License 2.0) Dropwizard Authentication (io.dropwizard:dropwizard-auth:4.0.2 - http://www.dropwizard.io/4.0.2/dropwizard-bom/dropwizard-dependencies/dropwizard-parent/dropwizard-auth)
@@ -354,7 +354,7 @@ Lists of 417 third-party dependencies.
      (Apache License, Version 2.0) Objenesis (org.objenesis:objenesis:3.2 - http://objenesis.org/objenesis)
      (The Apache Software License, Version 2.0) okhttp (com.squareup.okhttp3:okhttp:4.10.0 - https://square.github.io/okhttp/)
      (The Apache Software License, Version 2.0) okio (com.squareup.okio:okio-jvm:3.0.0 - https://github.com/square/okio/)
-     (Apache Software License, Version 2.0) openapi-java-client (io.dockstore:openapi-java-client:1.15.0-SNAPSHOT - no url defined)
+     (Apache Software License, Version 2.0) openapi-java-client (io.dockstore:openapi-java-client:1.15.0-alpha.13 - no url defined)
      (The Apache License, Version 2.0) OpenCensus (io.opencensus:opencensus-api:0.31.0 - https://github.com/census-instrumentation/opencensus-java)
      (Apache 2) opencsv (com.opencsv:opencsv:5.7.1 - http://opencsv.sf.net)
      (Apache 2.0) optics (io.circe:circe-optics_2.13:0.14.1 - https://github.com/circe/circe-optics)
@@ -395,7 +395,7 @@ Lists of 417 third-party dependencies.
      (Apache License 2.0) swagger-core-jakarta (io.swagger.core.v3:swagger-core-jakarta:2.2.15 - https://github.com/swagger-api/swagger-core/modules/swagger-core-jakarta)
      (Apache License 2.0) swagger-integration-jakarta (io.swagger.core.v3:swagger-integration-jakarta:2.2.15 - https://github.com/swagger-api/swagger-core/modules/swagger-integration-jakarta)
      (Apache Software License, Version 2.0) swagger-java-bitbucket-client (io.dockstore:swagger-java-bitbucket-client:2.0.3 - no url defined)
-     (Apache Software License, Version 2.0) swagger-java-client (io.dockstore:swagger-java-client:1.15.0-SNAPSHOT - no url defined)
+     (Apache Software License, Version 2.0) swagger-java-client (io.dockstore:swagger-java-client:1.15.0-alpha.13 - no url defined)
      (Apache Software License, Version 2.0) swagger-java-discourse-client (io.dockstore:swagger-java-discourse-client:2.0.1 - no url defined)
      (Apache Software License, Version 2.0) swagger-java-quay-client (io.dockstore:swagger-java-quay-client:2.0.2 - no url defined)
      (Apache Software License, Version 2.0) swagger-java-sam-client (io.dockstore:swagger-java-sam-client:2.0.2 - no url defined)

metricsaggregator/src/main/java/io/dockstore/metricsaggregator/helper/ExecutionTimeAggregator.java

@@ -82,7 +82,7 @@ public Optional<ExecutionTimeMetric> getAggregatedMetricFromWorkflowExecutions(L
                 .map(executionTime -> {
                     // Convert executionTime in ISO 8601 duration format to seconds
                     Duration parsedISO8601ExecutionTime = checkExecutionTimeISO8601Format(executionTime).get();
-                    return Long.valueOf(parsedISO8601ExecutionTime.toSeconds()).doubleValue();
+                    return (double) parsedISO8601ExecutionTime.toSeconds();
                 })
                 .toList();
 

metricsaggregator/src/main/java/io/dockstore/metricsaggregator/helper/RunExecutionAggregator.java

@@ -48,7 +48,7 @@ public interface RunExecutionAggregator<M, E> {
      */
     default List<E> getNonNullMetricsFromRunExecutions(List<RunExecution> runExecutions) {
         return runExecutions.stream()
-                .map(execution -> getMetricFromRunExecution(execution))
+                .map(this::getMetricFromRunExecution)
                 .filter(Objects::nonNull)
                 .toList();
     }
@@ -71,7 +71,7 @@ default Optional<M> getAggregatedMetricFromAllSubmissions(ExecutionsRequestBody
         // If task executions are present, calculate the workflow RunExecution containing the overall workflow-level execution time for each list of tasks
         if (!allSubmissions.getTaskExecutions().isEmpty()) {
             final List<RunExecution> calculatedWorkflowExecutionsFromTasks = allSubmissions.getTaskExecutions().stream()
-                    .map(taskExecutions -> getWorkflowExecutionFromTaskExecutions(taskExecutions))
+                    .map(this::getWorkflowExecutionFromTaskExecutions)
                     .filter(Optional::isPresent)
                     .map(Optional::get)
                     .toList();
@@ -80,7 +80,7 @@ default Optional<M> getAggregatedMetricFromAllSubmissions(ExecutionsRequestBody
 
         // Get aggregated metrics that were submitted to Dockstore
         List<M> aggregatedMetrics = allSubmissions.getAggregatedExecutions().stream()
-                .map(metrics -> getMetricFromMetrics(metrics))
+                .map(this::getMetricFromMetrics)
                 .filter(Objects::nonNull)
                 .collect(Collectors.toCollection(ArrayList::new));
 

pom.xml

@@ -38,7 +38,7 @@
 
         <github.url>scm:git:git@github.com:dockstore/dockstore-support.git</github.url>
         <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
-        <dockstore-core.version>1.15.0-SNAPSHOT</dockstore-core.version>
+        <dockstore-core.version>1.15.0-alpha.13</dockstore-core.version>
         <maven-surefire.version>3.0.0-M5</maven-surefire.version>
         <maven-failsafe.version>2.22.2</maven-failsafe.version>
         <skipTests>false</skipTests>