Add 10x-compatible matrix to the output list

dpeerlab · Mar 26, 2022 · abc7bac · abc7bac
1 parent ac62a6c
commit abc7bac
Showing 1 changed file with 3 additions and 0 deletions.
diff --git a/src/seqc/core/run.py b/src/seqc/core/run.py
@@ -533,6 +533,9 @@ def create_read_array(
             args.output_prefix + "_sparse_molecule_counts.mtx",
             args.output_prefix + "_sparse_counts_barcodes.csv",
             args.output_prefix + "_sparse_counts_genes.csv",
+            "raw_feature_bc_matrix/matrix.mtx.gz",
+            "raw_feature_bc_matrix/barcodes.tsv.gz",
+            "raw_feature_bc_matrix/features.tsv.gz",
         ]
 
         if os.path.exists(args.output_prefix + "_cb-correction.csv.gz"):