Merge pull request #998 from jiajic/mrd_xenium

feat: xenium convenience update

DESCRIPTION

@@ -60,7 +60,6 @@ Imports:
 Suggests:
     ArchR,
     arrow,
-    Biobase,
     biomaRt,
     ClusterR,
     clustree,
@@ -69,14 +68,12 @@ Suggests:
     DelayedMatrixStats,
     dendextend (>= 1.13.0),
     dplyr,
-    exactextractr,
     FactoMineR,
     factoextra,
     fitdistrplus,
     FNN,
     future,
     future.apply,
-    geometry,
     GiottoData,
     ggalluvial,
     ggdendro,
@@ -86,7 +83,6 @@ Suggests:
     graphcoloring,
     HDF5Array (>= 1.18.1),
     hdf5r,
-    htmlwidgets,
     jackstraw,
     kableExtra,
     knitr,
@@ -95,7 +91,6 @@ Suggests:
     multinet (>= 3.0.2),
     networkD3,
     pheatmap,
-    png,
     quadprog,
     harmony,
     R.utils,
@@ -105,10 +100,7 @@ Suggests:
     rhdf5,
     RTriangle (>= 1.6-0.10),
     Rvision,
-    S4Vectors,
     scater,
-    scatterpie,
-    scattermore,
     scran (>= 1.10.1),
     Seurat,
     sf,
@@ -121,10 +113,8 @@ Suggests:
     STexampleData,
     SummarizedExperiment,
     tidygraph,
-    tiff,
     trendsceek,
     testthat (>= 3.0.0),
-    qs,
     rmarkdown
 Remotes:
     drieslab/GiottoUtils,

NAMESPACE

@@ -265,6 +265,7 @@ export(hyperGeometricEnrich)
 export(identifyTMAcores)
 export(importCosMx)
 export(importVisiumHD)
+export(importXenium)
 export(initHMRF_V2)
 export(insertCrossSectionFeatPlot3D)
 export(insertCrossSectionSpatPlot3D)