diff --git a/docs/release-notes.md b/docs/release-notes.md index 6227585fb..0224b054a 100644 --- a/docs/release-notes.md +++ b/docs/release-notes.md @@ -19,29 +19,29 @@ bugfix/update release **framework** - various enhancements, including: - - set `$LMOD_TERSE_DECORATIONS` to '`no`' to avoid additional info in output produced by '`ml --terse avail`' ([#4648](https://github.com/easybuilders/easybuild-framework/pull/4648)) + - set `$LMOD_TERSE_DECORATIONS` to '`no`' to avoid additional info in output produced by '`ml --terse avail`' ([#4648](https://github.com/easybuilders/easybuild-framework/pull/4648)) - various bug fixes, including: - - implement workaround for permission error when copying read-only files that have extended attributes set and using Python 3.6 ([#4642](https://github.com/easybuilders/easybuild-framework/pull/4642)) - - take into account alternate sysroot for `/bin/bash` used by `run_cmd` ([#4646](https://github.com/easybuilders/easybuild-framework/pull/4646)) + - implement workaround for permission error when copying read-only files that have extended attributes set and using Python 3.6 ([#4642](https://github.com/easybuilders/easybuild-framework/pull/4642)) + - take into account alternate sysroot for `/bin/bash` used by `run_cmd` ([#4646](https://github.com/easybuilders/easybuild-framework/pull/4646)) **easyblocks** - various enhancements, including: - - allow Python bundles and packages to specify a maximum Python version for the system toolchain ([#3431](https://github.com/easybuilders/easybuild-easyblocks/pull/3431)) - - copy `EasyConfig` instance in constructor of `Bundle` and `Cargo` easyblocks before making changes to it ([#3448](https://github.com/easybuilders/easybuild-easyblocks/pull/3448)) - - fix crash in GCC easyblock when `cuda-compute-capabilities` EasyBuild configuration option is not set ([#3449](https://github.com/easybuilders/easybuild-easyblocks/pull/3449)) + - allow Python bundles and packages to specify a maximum Python version for the system toolchain ([#3431](https://github.com/easybuilders/easybuild-easyblocks/pull/3431)) + - copy `EasyConfig` instance in constructor of `Bundle` and `Cargo` easyblocks before making changes to it ([#3448](https://github.com/easybuilders/easybuild-easyblocks/pull/3448)) + - fix crash in GCC easyblock when `cuda-compute-capabilities` EasyBuild configuration option is not set ([#3449](https://github.com/easybuilders/easybuild-easyblocks/pull/3449)) - various bug fixes, including: - - ignore Python from virtualenvs in GROMACS configure via `-DPython3_FIND_VIRTUALENV=STANDARD` ([#3283](https://github.com/easybuilders/easybuild-easyblocks/pull/3283)) - - enhance custom easyblock for NCCL: add licence to NCCL installation ([#3451](https://github.com/easybuilders/easybuild-easyblocks/pull/3451)) + - ignore Python from virtualenvs in GROMACS configure via `-DPython3_FIND_VIRTUALENV=STANDARD` ([#3283](https://github.com/easybuilders/easybuild-easyblocks/pull/3283)) + - enhance custom easyblock for NCCL: add licence to NCCL installation ([#3451](https://github.com/easybuilders/easybuild-easyblocks/pull/3451)) **easyconfigs** - added example easyconfig files for 14 new software packages: - - Biotite ([#21026](https://github.com/easybuilders/easybuild-easyconfigs/pull/21026)), chopper ([#21418](https://github.com/easybuilders/easybuild-easyconfigs/pull/21418)), CLUMPP ([#21329](https://github.com/easybuilders/easybuild-easyconfigs/pull/21329)), cramino ([#21382](https://github.com/easybuilders/easybuild-easyconfigs/pull/21382)), dub ([#21378](https://github.com/easybuilders/easybuild-easyconfigs/pull/21378)), ESM3 ([#21026](https://github.com/easybuilders/easybuild-easyconfigs/pull/21026)), GOMC ([#21008](https://github.com/easybuilders/easybuild-easyconfigs/pull/21008)), + - Biotite ([#21026](https://github.com/easybuilders/easybuild-easyconfigs/pull/21026)), chopper ([#21418](https://github.com/easybuilders/easybuild-easyconfigs/pull/21418)), CLUMPP ([#21329](https://github.com/easybuilders/easybuild-easyconfigs/pull/21329)), cramino ([#21382](https://github.com/easybuilders/easybuild-easyconfigs/pull/21382)), dub ([#21378](https://github.com/easybuilders/easybuild-easyconfigs/pull/21378)), ESM3 ([#21026](https://github.com/easybuilders/easybuild-easyconfigs/pull/21026)), GOMC ([#21008](https://github.com/easybuilders/easybuild-easyconfigs/pull/21008)), MOKIT ([#21352](https://github.com/easybuilders/easybuild-easyconfigs/pull/21352)), nanoQC ([#21371](https://github.com/easybuilders/easybuild-easyconfigs/pull/21371)), phasius ([#21389](https://github.com/easybuilders/easybuild-easyconfigs/pull/21389)), PyBullet ([#21356](https://github.com/easybuilders/easybuild-easyconfigs/pull/21356)), rnamotif ([#21336](https://github.com/easybuilders/easybuild-easyconfigs/pull/21336)), versioningit ([#21424](https://github.com/easybuilders/easybuild-easyconfigs/pull/21424)), xskillscore ([#21351](https://github.com/easybuilders/easybuild-easyconfigs/pull/21351)) - added additional easyconfigs for various supported software packages, including: - - awscli 2.17.54, BiG-SCAPE-1.1.9, ccache 4.10.2, CLHEP 2.4.7.1, CREST 3.0.2, decona 1.4-2024073, dftd4 3.7.0, + - awscli 2.17.54, BiG-SCAPE-1.1.9, ccache 4.10.2, CLHEP 2.4.7.1, CREST 3.0.2, decona 1.4-2024073, dftd4 3.7.0, GATE 9.4, Gdk-Pixbuf 2.42.11, Geant4 11.2.2, Geant4-data 11.2, Ghostscript 10.03.1, GitPython 3.1.43, GObject-Introspection 1.80.1, HarfBuzz 9.0.0, ImageMagick 7.1.1-38, JasPer 4.2.4, joypy 0.2.6, Julia 1.10.4, LDC 1.39.0, Leptonica 1.84.1, Markdown 3.7, MPICH 4.2.2, NanoComp 1.24.0, nanoget 1.19.3, nanomath 1.4.0, @@ -50,18 +50,18 @@ bugfix/update release scikit-build-core 0.10.6, sleuth 0.30.1, SNAP-ESA 10.0.0, tesseract 5.3.4, Triton 2.1.0, TurboVNC 3.1.2, VirtualGL 3.1.1, zlib-ng 2.2.1 - minor enhancements, including: - - enable support for Apache ORC to Arrow v14.0.1 and v16.1.0 ([#21056](https://github.com/easybuilders/easybuild-easyconfigs/pull/21056)) - - use proper dependency for tensorboard in easyconfigs for TensorFlow v2.15.1 ([#21337](https://github.com/easybuilders/easybuild-easyconfigs/pull/21337)) + - enable support for Apache ORC to Arrow v14.0.1 and v16.1.0 ([#21056](https://github.com/easybuilders/easybuild-easyconfigs/pull/21056)) + - use proper dependency for tensorboard in easyconfigs for TensorFlow v2.15.1 ([#21337](https://github.com/easybuilders/easybuild-easyconfigs/pull/21337)) - various bug fixes, including: - - account for crates for easyconfigs using Cargo-based easyblock when determining checksums for patches in easyconfigs test suite ([#21419](https://github.com/easybuilders/easybuild-easyconfigs/pull/21419)) - - avoid missing symbol in `mclust` extension of R-4.0.3 w/ foss/2020b ([#21429](https://github.com/easybuilders/easybuild-easyconfigs/pull/21429)) - - fix build of librosa 0.10.1 in some environments by removing "python -m build" for soxr extension ([#21434](https://github.com/easybuilders/easybuild-easyconfigs/pull/21434)) - - fix repeated sanity check runs in manta easyconfigs ([#21435](https://github.com/easybuilders/easybuild-easyconfigs/pull/21435)) - - fix `test_easyconfig_locations` when easyconfigs index is present ([#21394](https://github.com/easybuilders/easybuild-easyconfigs/pull/21394)) - - use proper dependency for libnsl in git-annex ([#21441](https://github.com/easybuilders/easybuild-easyconfigs/pull/21441)) - - avoid writing into `~/.stack` directory during build for git-annex ([#21452](https://github.com/easybuilders/easybuild-easyconfigs/pull/21452)) + - account for crates for easyconfigs using Cargo-based easyblock when determining checksums for patches in easyconfigs test suite ([#21419](https://github.com/easybuilders/easybuild-easyconfigs/pull/21419)) + - avoid missing symbol in `mclust` extension of R-4.0.3 w/ foss/2020b ([#21429](https://github.com/easybuilders/easybuild-easyconfigs/pull/21429)) + - fix build of librosa 0.10.1 in some environments by removing "python -m build" for soxr extension ([#21434](https://github.com/easybuilders/easybuild-easyconfigs/pull/21434)) + - fix repeated sanity check runs in manta easyconfigs ([#21435](https://github.com/easybuilders/easybuild-easyconfigs/pull/21435)) + - fix `test_easyconfig_locations` when easyconfigs index is present ([#21394](https://github.com/easybuilders/easybuild-easyconfigs/pull/21394)) + - use proper dependency for libnsl in git-annex ([#21441](https://github.com/easybuilders/easybuild-easyconfigs/pull/21441)) + - avoid writing into `~/.stack` directory during build for git-annex ([#21452](https://github.com/easybuilders/easybuild-easyconfigs/pull/21452)) - other changes: - - remove `exts_default_options` from TensorFlow 2.3.1 ([#21290](https://github.com/easybuilders/easybuild-easyconfigs/pull/21290)) + - remove `exts_default_options` from TensorFlow 2.3.1 ([#21290](https://github.com/easybuilders/easybuild-easyconfigs/pull/21290)) ## EasyBuild v4.9.3 (14 Sept 2024) {: #release_notes_eb493 }