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1. PacBio-16S-CCS-QC-Pipeline PacBio-16S-CCS-QC-Pipeline Public

   Forked from hanakoagresta/PacBio-16S-CCS-QC-Pipeline

   This code accompanies my honors thesis...

   Python 1

2. genome_uploader_co-assemblies genome_uploader_co-assemblies Public

   Forked from EBI-Metagenomics/genome_uploader

   Python script to upload bins and MAGs to ENA (European Nucleotide Archive)

   Python

3. metaWRAP metaWRAP Public

   Forked from bxlab/metaWRAP

   MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis

   Shell

4. pb-16S-nf pb-16S-nf Public

   Forked from PacificBiosciences/HiFi-16S-workflow

   Nextflow pipeline to analyze PacBio HiFi full-length 16S data

   Nextflow

5. fetch_tool fetch_tool Public

   Forked from EBI-Metagenomics/fetch_tool

   Tool which allows you to fetch RAW read files from the European Nucleotide Archive (ENA)

   Python

6. in_house_scripts in_house_scripts Public

   Forked from Ales-ibt/in_house_scripts

   Scripts collection for genomic data manipulation

   Perl