backwards_ecal,ecal_gaps: install python dependencies to venv

eic · Oct 3, 2024 · 0d3435b · 0d3435b
1 parent f04a369
commit 0d3435b
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Showing 2 changed files with 4 additions and 2 deletions.
diff --git a/benchmarks/backwards_ecal/config.yml b/benchmarks/backwards_ecal/config.yml
@@ -24,7 +24,8 @@ bench:backwards_ecal:
   needs:
     - ["sim:backwards_ecal"]
   script:
-    - export PYTHONUSERBASE=$LOCAL_DATA_PATH/deps
+    - unset PYTHONPATH
+    - python -m venv .venv; source .venv/bin/activate
     - pip install -r benchmarks/backwards_ecal/requirements.txt
     - snakemake --cores 1 backwards_ecal
 

diff --git a/benchmarks/ecal_gaps/config.yml b/benchmarks/ecal_gaps/config.yml
@@ -13,7 +13,8 @@ bench:ecal_gaps:
     - ["sim:ecal_gaps"]
   script:
     - ln -s $LOCAL_DATA_PATH/input input
-    - export PYTHONUSERBASE=$LOCAL_DATA_PATH/deps
+    - unset PYTHONPATH
+    - python -m venv .venv; source .venv/bin/activate
     - pip install -r benchmarks/ecal_gaps/requirements.txt
     - snakemake --cores 8 ecal_gaps