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Update reconstruction tutorial with simpler API #640

Update reconstruction tutorial with simpler API

Update reconstruction tutorial with simpler API #640

Workflow file for this run

name: CI
on: [workflow_dispatch, pull_request, push]
jobs:
test:
runs-on: ubuntu-latest
steps:
- name: Checkout repository
uses: actions/checkout@v3
- name: Activate conda env with environment.yml
uses: mamba-org/setup-micromamba@v1
with:
environment-file: environment.yml
cache-environment: true
post-cleanup: 'all'
- name: Install nbdev
shell: bash -l {0}
run: |
pip install -U nbdev
- name: Doing editable install
shell: bash -l {0}
run: |
test -f setup.py && pip install -e ".[dev]"
- name: Check we are starting with clean git checkout
shell: bash -l {0}
run: |
if [[ `git status --porcelain -uno` ]]; then
git diff
echo "git status is not clean"
false
fi
- name: Trying to strip out notebooks
shell: bash -l {0}
run: |
nbdev_clean
git status -s # display the status to see which nbs need cleaning up
if [[ `git status --porcelain -uno` ]]; then
git status -uno
echo -e "!!! Detected unstripped out notebooks\n!!!Remember to run nbdev_install_hooks"
echo -e "This error can also happen if you are using an older version of nbdev relative to what is in CI. Please try to upgrade nbdev with the command `pip install -U nbdev`"
false
fi
- name: Run nbdev_export
shell: bash -l {0}
run: |
nbdev_export
if [[ `git status --porcelain -uno` ]]; then
echo "::error::Notebooks and library are not in sync. Please run nbdev_export."
git status -uno
git diff
exit 1;
fi
- name: Run nbdev_test
shell: bash -l {0}
run: |
nbdev_test