create-issue.yml

name: "Create issue: Publish manuscript"

on:
  workflow_dispatch:
    inputs:
      msid:
        description: "Manuscript ID (e.g. 84855)"
        required: true
      versionManuscript:
        description: "Manuscript version (default: 1)"
        default: "1"
        required: true
      preprint-doi:
        description: "Preprint DOI (e.g.: 10.1101/2021.06.21.449261)"
        required: true

jobs:
  create-doi-issue:
    runs-on: ubuntu-latest
    permissions:
      issues: write

    steps:
    - name: Checkout repository
      uses: actions/checkout@v4

    - name: Get issue number
      id: issue
      run: |
        echo "ISSUE_NUMBER=$(curl --silent -H "Accept: application/vnd.github+json" https://api.github.com/repos/${{ github.repository }}/issues?state=all | jq -r '.[0].number' | expr "$(cat)" + 1)" >> $GITHUB_ENV

    - uses: imjohnbo/extract-issue-template-fields@v1
      id: extract
      with:
        path: .github/ISSUE_TEMPLATE/publish_manuscript.md

    - uses: bluwy/substitute-string-action@v2
      id: title
      with:
        _input-text: "${{ steps.extract.outputs.title }}"
        _format-key: '%%key%%'
        preprint-doi: "${{ github.event.inputs.preprint-doi }}"
        msid: "${{ github.event.inputs.msid }}"
        version: "${{ github.event.inputs.versionManuscript }}"

    - uses: bluwy/substitute-string-action@v2
      id: body
      with:
        _input-text: "${{ steps.extract.outputs.body }}"
        _format-key: '%%key%%'
        preprint-doi: "${{ github.event.inputs.preprint-doi }}"
        msid: "${{ github.event.inputs.msid }}"
        version: "${{ github.event.inputs.versionManuscript }}"
        repo: "${{ github.repository }}"
        issue-id: "${{ env.ISSUE_NUMBER }}"

    - name: "Create issue: Publish manuscript ${{ github.event.inputs.versionManuscript }}v${{ github.event.inputs.versionManuscript }}"
      uses: imjohnbo/issue-bot@v3
      with:
        assignees: ${{ steps.extract.outputs.assignees }}
        labels: ${{ steps.extract.outputs.labels }}
        title: "${{ steps.title.outputs.result }}"
        body: "${{ steps.body.outputs.result }}"
        project-v2-path: orgs/elifesciences/projects/16
        token: ${{ secrets.PAT }}