1000G Downloader

Download sample from 1000G project.

Getting Started

Installation

pip install one_thousand_genomes_downloader

Usage example

downloader = OneThousandGenomesDownloader()
downloader('HG00102')

Documentation

Class OneThousandGenomesDownloader

OneThousandGenomesDownloader()

• file_format: the file format of the sample: bam or cram
• use_mapped_file: if to download the mapped or the unmapped file
• use_exome_alignment: if to download from the exome alignment folder
• on_download_finish: a callback function
• output_folder: output folder

Contact

Elior Avraham – elior.av@gmail.com