generate-map-data.yaml

on:
  workflow_dispatch:
  schedule:
    - cron:  '23 2 * * 2'

name: 'Generate map data'

jobs:
  fetch-data:
    runs-on: ubuntu-latest
    env:
      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
    steps:
      - uses: actions/checkout@v4

      - uses: r-lib/actions/setup-r@v2
        with:
          use-public-rspm: true

      - uses: r-lib/actions/setup-r-dependencies@v2
        with:
          extra-packages: |
            local::.
            epiverse-connect/epiverse-scraper
            jsonlite

      - name: Update data
        env:
          EMBEDDINGS_LOCATION: ${{ secrets.EMBEDDINGS_LOCATION }}
        run: |
          source("data-raw/json_map.R")
        shell: Rscript {0}

      - name: Commit latest data
        run: |
          git config user.email "action@github.com"
          git config user.name "GitHub Actions"
          git add inst/extdata/map_data.json
          git commit -m "Fetch map data"
          git pull --rebase origin main
          git push
          echo "pushed to github"

  trigger-deploy:
    needs: fetch-data
    runs-on: ubuntu-latest
    env:
      GITHUB_TOKEN: ${{ secrets.EPIVERSE_CONNECT_PAT }}
    steps:
      - uses: actions/checkout@v4

      - name: Trigger re-deploy of the front-end
        run: |
          gh workflow run auto-deploy-pages.yml --repo epiverse-connect/epiverse-search-frontend