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@ersilia-os

Ersilia Open Source Initiative

Ersilia is a charity developing open source tools to facilitate global health drug discovery, with a focus on neglected diseases, for equal healthcare

🦠 Welcome to Ersilia 💊

  • 🙋‍ The Ersilia Open Source Initiative is a non-profit organization dedicated to promoting open-source science and fostering a collaborative community.
  • 🌍 Our mission is to equip laboratories in the Global South with machine learning and data science tools for drug discovery, empowering them to address local and global health challenges.
  • 🧙 Browse the Ersilia Model Hub, our repository of pre-trained machine learning models!
  • 📚 Visit more extensive documentation in the Ersilia Book.

🌟 Get Involved

We encourage participation from researchers, developers, and enthusiasts around the world. By contributing to our open-source projects, you can help us make a difference in the lives of people in the Global South.

  • 🤝 Collaborate with us on our projects by contributing code, ideas, or expertise.
  • 💡 Share our work with your network to increase awareness and support.
  • 🚀 Adopt our open-source tools and models in your research or organization to help drive scientific progress.

Together, we can make a lasting impact through open-source science and empower the Global South to tackle health challenges with the power of machine learning and data science.

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  1. ersilia ersilia Public

    The Ersilia Model Hub, a repository of AI/ML models for infectious and neglected disease research.

    Python 210 145

  2. eos-template eos-template Public template

    Template repository to add new models to the Ersilia Model Hub

    Python 1 1

  3. olinda olinda Public

    Chemistry model distillation, based on 1024-dimensional embeddings

    Python 4 1

  4. chemxor chemxor Public

    Privacy preserving machine learning for small molecule data

    Python 9 1

  5. zaira-chem zaira-chem Public

    Automated QSAR based on multiple small molecule descriptors

    Python 28 10

  6. isaura isaura Public

    A lake of precalculated properties of biomedical entities based on the Ersilia Model Hub

    Python 1 2

Repositories

Showing 10 of 265 repositories
  • ersilia Public

    The Ersilia Model Hub, a repository of AI/ML models for infectious and neglected disease research.

    ersilia-os/ersilia’s past year of commit activity
    Python 210 GPL-3.0 145 40 (4 issues need help) 12 Updated Oct 14, 2024
  • stylia Public

    Decent scientific plot styles

    ersilia-os/stylia’s past year of commit activity
    Jupyter Notebook 2 GPL-3.0 1 0 0 Updated Oct 10, 2024
  • ersilia-client Public

    Simple client to the Ersilia Model Hub for containerized models

    ersilia-os/ersilia-client’s past year of commit activity
    Python 0 GPL-3.0 3 0 0 Updated Oct 10, 2024
  • ersilia-pack Public

    Module to pack Ersilia models with FastAPI

    ersilia-os/ersilia-pack’s past year of commit activity
    Python 1 GPL-3.0 4 9 (7 issues need help) 1 Updated Oct 10, 2024
  • ersilia-assistant Public

    A chat assistant to help you design experimental workflows with Ersilia models with ease!

    ersilia-os/ersilia-assistant’s past year of commit activity
    Python 0 GPL-3.0 0 3 0 Updated Oct 7, 2024
  • sars-cov-2-chemspace Public

    This repository explores the chemical space associated with SARS-CoV-2 according to manually curated data at UB-CeDD

    ersilia-os/sars-cov-2-chemspace’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 0 1 0 Updated Oct 3, 2024
  • ai2050-dd-workshop Public

    AI/ML tools for drug discovery workshop workshop held in Ghana, September 2024

    ersilia-os/ai2050-dd-workshop’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated Oct 3, 2024
  • pharmacogx-embeddings Public

    Pharmacogenomics knowledge graph embeddings and related analyses

    ersilia-os/pharmacogx-embeddings’s past year of commit activity
    Jupyter Notebook 3 GPL-3.0 0 5 (1 issue needs help) 0 Updated Oct 3, 2024
  • pharmacogx-arsa Public

    Look for abundant region specific alleles for pharmacogenomics

    ersilia-os/pharmacogx-arsa’s past year of commit activity
    Jupyter Notebook 1 GPL-3.0 0 0 0 Updated Sep 30, 2024
  • eos9ei3 Public

    Estimation of synthetic accessibility score of drug-like molecules based on molecular complexity and fragment contributions

    ersilia-os/eos9ei3’s past year of commit activity
    Python 2 GPL-3.0 1 0 1 Updated Sep 29, 2024

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