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Issues: facebookresearch/esm

108 Open 212 Closed
108 Open 212 Closed
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Issues list

Warning bieng raised with 'cpu-offloading' option and generating structure takes forever
#699 opened Jul 31, 2024 by amani-acog
ESMFold crashing with specific FASTA files
#698 opened Jul 26, 2024 by npcooley
esmfold_v1() error in pl_upgrades branch for pytorch v2 and cuda v12
#696 opened Jul 18, 2024 by MaxChu719
1
An error occurred when configuring the esmfold environment
#695 opened Jul 4, 2024 by 20191864241
Codes to fine-tune ESM-IF1
#694 opened Jul 3, 2024 by tuln128
Runtime in half precision
#692 opened Jun 13, 2024 by Hrovatin
[BUG] Fasta header with special characters alter output path
#691 opened Jun 11, 2024 by jspaezp
Missing CUDA availability check in ESM-1v example
#688 opened May 30, 2024 by ebeurer
Fine tuning on sequencing classification data
#686 opened May 27, 2024 by BIOBRICK
Different result with esmfold server
#683 opened May 20, 2024 by lzygitk7
1
offset=24 in [Zero-shot variant prediction with protein language models]
#680 opened Apr 24, 2024 by yinshiyi
Why the inpu size of embedding is 33?
#679 opened Apr 19, 2024 by fulacse
1
Contact prediction for multimeric proteins
#678 opened Apr 19, 2024 by AnjaliSetiya
1
Failed to build openfold
#677 opened Apr 16, 2024 by AlejandroSanchezCano
3
Error when predicting contacts for heterodimer
#674 opened Apr 8, 2024 by AnjaliSetiya
RuntimeError
#670 opened Mar 8, 2024 by tonyageall
5
the specific code of the ESM2 model
#669 opened Mar 8, 2024 by GriffithLin
Query on Alphabet Consistency Across Different Scales of ESM2 Models [8M, 35M, 150M, 650M, 3B, 150B]
#668 opened Mar 8, 2024 by CNwangbin
fold.py in naming pdb file
#660 opened Feb 16, 2024 by yzhang-github-pub
ESMFold for multimer fails when using HuggingFace installation
#656 opened Feb 1, 2024 by eliottpark
1
How to train LinearProjectionDistogramModel for my data？
#655 opened Jan 30, 2024 by hasaiki136
requests.exceptions.SSLError :: Streamlit
#654 opened Jan 30, 2024 by tcchola
AttributeError: module 'deepspeed' has no attribute 'comm'
#652 opened Jan 20, 2024 by YvetteJxy
3
how to input cropped protein for ESM-2 ?
#651 opened Jan 13, 2024 by GriffithLin
1
index out of bounds during zero-shot with msa1b
#649 opened Jan 12, 2024 by Maxwell-downtown
ProTip! Exclude everything labeled bug with -label:bug.