forked from Project-MONAI/MONAI
-
Notifications
You must be signed in to change notification settings - Fork 0
173 lines (168 loc) · 5.88 KB
/
pythonapp-min.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
# Jenkinsfile.monai-premerge
name: premerge-min
on:
# quick tests for pull requests and the releasing branches
push:
branches:
- dev
- main
- releasing/*
pull_request:
concurrency:
# automatically cancel the previously triggered workflows when there's a newer version
group: build-min-${{ github.event.pull_request.number || github.ref }}
cancel-in-progress: true
jobs:
# caching of these jobs:
# - docker-py3-pip- (shared)
# - ubuntu py37 pip-
# - os-latest-pip- (shared)
min-dep-os: # min dependencies installed tests for different OS
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [windows-latest, macOS-latest, ubuntu-latest]
timeout-minutes: 40
steps:
- uses: actions/checkout@v3
- name: Set up Python 3.8
uses: actions/setup-python@v4
with:
python-version: '3.8'
- name: Prepare pip wheel
run: |
which python
python -m pip install --upgrade pip wheel
- name: cache weekly timestamp
id: pip-cache
run: |
echo "datew=$(date '+%Y-%V')" >> $GITHUB_OUTPUT
echo "dir=$(pip cache dir)" >> $GITHUB_OUTPUT
shell: bash
- name: cache for pip
uses: actions/cache@v3
id: cache
with:
path: ${{ steps.pip-cache.outputs.dir }}
key: ${{ matrix.os }}-latest-pip-${{ steps.pip-cache.outputs.datew }}
- if: runner.os == 'windows'
name: Install torch cpu from pytorch.org (Windows only)
run: |
python -m pip install torch==1.13.1+cpu -f https://download.pytorch.org/whl/torch_stable.html
- name: Install the dependencies
run: |
# min. requirements
python -m pip install torch==1.13.1
python -m pip install -r requirements-min.txt
python -m pip list
BUILD_MONAI=0 python setup.py develop # no compile of extensions
shell: bash
- name: Run quick tests (CPU ${{ runner.os }})
run: |
python -c 'import torch; print(torch.__version__); print(torch.rand(5,3))'
python -c "import monai; monai.config.print_config()"
./runtests.sh --min
shell: bash
env:
QUICKTEST: True
min-dep-py3: # min dependencies installed tests for different python
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: ['3.7', '3.8', '3.9', '3.10', '3.11']
timeout-minutes: 40
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Prepare pip wheel
run: |
which python
python -m pip install --user --upgrade pip setuptools wheel
- name: cache weekly timestamp
id: pip-cache
run: |
echo "datew=$(date '+%Y-%V')" >> $GITHUB_OUTPUT
echo "dir=$(pip cache dir)" >> $GITHUB_OUTPUT
shell: bash
- name: cache for pip
uses: actions/cache@v3
id: cache
with:
path: ${{ steps.pip-cache.outputs.dir }}
key: ubuntu-latest-latest-pip-${{ steps.pip-cache.outputs.datew }}
- name: Install the dependencies
run: |
# min. requirements
python -m pip install torch --extra-index-url https://download.pytorch.org/whl/cpu
python -m pip install -r requirements-min.txt
python -m pip list
BUILD_MONAI=0 python setup.py develop # no compile of extensions
shell: bash
- name: Run quick tests (CPU ${{ runner.os }})
run: |
python -c 'import torch; print(torch.__version__); print(torch.rand(5,3))'
python -c "import monai; monai.config.print_config()"
./runtests.sh --min
env:
QUICKTEST: True
min-dep-pytorch: # min dependencies installed tests for different pytorch
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
pytorch-version: ['1.8.2', '1.9.1', '1.10.2', '1.11.0', '1.12.1', 'latest']
timeout-minutes: 40
steps:
- uses: actions/checkout@v3
- name: Set up Python 3.8
uses: actions/setup-python@v4
with:
python-version: '3.8'
- name: Prepare pip wheel
run: |
which python
python -m pip install --user --upgrade pip setuptools wheel
- name: cache weekly timestamp
id: pip-cache
run: |
echo "datew=$(date '+%Y-%V')" >> $GITHUB_OUTPUT
echo "dir=$(pip cache dir)" >> $GITHUB_OUTPUT
shell: bash
- name: cache for pip
uses: actions/cache@v3
id: cache
with:
path: ${{ steps.pip-cache.outputs.dir }}
key: ubuntu-latest-latest-pip-${{ steps.pip-cache.outputs.datew }}
- name: Install the dependencies
run: |
# min. requirements
if [ ${{ matrix.pytorch-version }} == "latest" ]; then
python -m pip install torch
elif [ ${{ matrix.pytorch-version }} == "1.8.2" ]; then
python -m pip install torch==1.8.2 --extra-index-url https://download.pytorch.org/whl/lts/1.8/cpu
elif [ ${{ matrix.pytorch-version }} == "1.9.1" ]; then
python -m pip install torch==1.9.1
elif [ ${{ matrix.pytorch-version }} == "1.10.2" ]; then
python -m pip install torch==1.10.2
elif [ ${{ matrix.pytorch-version }} == "1.11.0" ]; then
python -m pip install torch==1.11.0
elif [ ${{ matrix.pytorch-version }} == "1.12.1" ]; then
python -m pip install torch==1.12.1
fi
python -m pip install -r requirements-min.txt
python -m pip list
BUILD_MONAI=0 python setup.py develop # no compile of extensions
shell: bash
- name: Run quick tests (pytorch ${{ matrix.pytorch-version }})
run: |
python -c 'import torch; print(torch.__version__); print(torch.rand(5,3))'
python -c "import monai; monai.config.print_config()"
./runtests.sh --min
env:
QUICKTEST: True