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I'm running the following macro and find that afterwards I get the same image result (ie. shows adjusted blending parameters), even when adjust_blending_parameters is not set.
run("Fuse/Deconvolve Dataset", "select_xml=C:\Users\Richard\Downloads\\beads_02micro_1.sld_capture_5.xml process_angle=[All angles] process_channel=[Single channel (Select from List)] process_illumination=[Single illumination (Select from List)] process_timepoint=[Single Timepoint (Select from List)] processing_channel=[channel 488a] processing_illumination=[illumination capture_5] processing_timepoint=[Timepoint 0] type_of_image_fusion=[Multi-view deconvolution] bounding_box=[Use pre-defined Bounding Box] fused_image=[Display using ImageJ] bounding_box_title=dim_175.38x972.80x175.38_px_offset_0.00x0.00x0.00_px imglib2_container=[CellImg (large images)] imglib2_container_ffts=[PlanarImg (large images, easy to display)] type_of_iteration=[Independent (slow, very precise)] image_weights=[Virtual weights (less memory, slower)] osem_acceleration=[1 (balanced)] number_of_iterations=1 adjust_blending_parameters use_tikhonov_regularization tikhonov_parameter=0.0060 compute=[Entire image at once] compute_on=[CPU (Java)] psf_estimation=[Provide file with PSF] psf_display=[Do not show PSFs] psf_file_(angle=path_a,=[C:\Users\Richard\Downloads\\beads_02micro_1.sld transfomed PSF of viewsetup 0.tif] psf_file_(angle=path_b,=[C:\Users\Richard\Downloads\\beads_02micro_1.sld transfomed PSF of viewsetup 1.tif] boundary_pixels_x=0 boundary_pixels_y=0 boundary_pixels_z=0 blending_range_x=0 blending_range_y=0 blending_range_z=0");
Is this expected behavior? How should I reset the blending parameters to the default behavior?
Thanks!
Result images 1) macro before adjusting blending
same macro but adjusting blending
same macro before adjusting blending (but looks like image 2 not image 1)
The text was updated successfully, but these errors were encountered:
I'm running the following macro and find that afterwards I get the same image result (ie. shows adjusted blending parameters), even when adjust_blending_parameters is not set.
run("Fuse/Deconvolve Dataset", "select_xml=C:\Users\Richard\Downloads\\beads_02micro_1.sld_capture_5.xml process_angle=[All angles] process_channel=[Single channel (Select from List)] process_illumination=[Single illumination (Select from List)] process_timepoint=[Single Timepoint (Select from List)] processing_channel=[channel 488a] processing_illumination=[illumination capture_5] processing_timepoint=[Timepoint 0] type_of_image_fusion=[Multi-view deconvolution] bounding_box=[Use pre-defined Bounding Box] fused_image=[Display using ImageJ] bounding_box_title=dim_175.38x972.80x175.38_px_offset_0.00x0.00x0.00_px imglib2_container=[CellImg (large images)] imglib2_container_ffts=[PlanarImg (large images, easy to display)] type_of_iteration=[Independent (slow, very precise)] image_weights=[Virtual weights (less memory, slower)] osem_acceleration=[1 (balanced)] number_of_iterations=1 adjust_blending_parameters use_tikhonov_regularization tikhonov_parameter=0.0060 compute=[Entire image at once] compute_on=[CPU (Java)] psf_estimation=[Provide file with PSF] psf_display=[Do not show PSFs] psf_file_(angle=path_a,=[C:\Users\Richard\Downloads\\beads_02micro_1.sld transfomed PSF of viewsetup 0.tif] psf_file_(angle=path_b,=[C:\Users\Richard\Downloads\\beads_02micro_1.sld transfomed PSF of viewsetup 1.tif] boundary_pixels_x=0 boundary_pixels_y=0 boundary_pixels_z=0 blending_range_x=0 blending_range_y=0 blending_range_z=0");
Is this expected behavior? How should I reset the blending parameters to the default behavior?
Thanks!
Result images 1) macro before adjusting blending
same macro but adjusting blending
same macro before adjusting blending (but looks like image 2 not image 1)
The text was updated successfully, but these errors were encountered: