Merge branch '2-alpha' into sequence-reference-name-change #395
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The following actions uses node12 which is deprecated and will be forced to run on node16: actions/cache@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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