Pin scipy to >=1.14.1 for Python 3.13 support #125
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Test Galaxy packages for Pulsar | |
| on: | |
| push: | |
| paths-ignore: | |
| - 'client/**' | |
| - 'doc/**' | |
| - 'lib/galaxy_test/selenium/**' | |
| pull_request: | |
| paths-ignore: | |
| - 'client/**' | |
| - 'doc/**' | |
| - 'lib/galaxy_test/selenium/**' | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| test: | |
| name: Test | |
| runs-on: ubuntu-22.04 # Python 3.7 is not available via setup-python on ubuntu >=24.04 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ['3.7'] # don't upgrade, see https://github.com/galaxyproject/galaxy/pull/16649 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| path: 'galaxy root' | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: 'pip' | |
| cache-dependency-path: 'galaxy root/requirements.txt' | |
| - name: Install Apptainer's singularity | |
| uses: eWaterCycle/setup-apptainer@v2 | |
| - name: Install ffmpeg | |
| run: sudo apt-get update && sudo apt-get -y install ffmpeg | |
| - name: Install tox | |
| run: pip install tox | |
| - name: Run tests | |
| run: tox -e test_galaxy_packages_for_pulsar | |
| working-directory: 'galaxy root' |