From 077e35a540b0caca30f52d0ab2b58853f315cb3b Mon Sep 17 00:00:00 2001 From: galaxybot Date: Sat, 28 Oct 2023 03:17:24 +0000 Subject: [PATCH] Update Python dependencies --- lib/galaxy/dependencies/dev-requirements.txt | 10 +++++----- lib/galaxy/dependencies/pinned-lint-requirements.txt | 2 +- lib/galaxy/dependencies/pinned-requirements.txt | 8 ++++---- .../dependencies/pinned-typecheck-requirements.txt | 2 +- 4 files changed, 11 insertions(+), 11 deletions(-) diff --git a/lib/galaxy/dependencies/dev-requirements.txt b/lib/galaxy/dependencies/dev-requirements.txt index 73e10ec34d11..5afc8c8ce588 100644 --- a/lib/galaxy/dependencies/dev-requirements.txt +++ b/lib/galaxy/dependencies/dev-requirements.txt @@ -8,7 +8,7 @@ async-timeout==4.0.3 ; python_version >= "3.7" and python_version < "3.12" asynctest==0.13.0 ; python_version >= "3.7" and python_version < "3.8" attrs==23.1.0 ; python_version >= "3.7" and python_version < "3.12" axe-selenium-python==2.1.6 ; python_version >= "3.7" and python_version < "3.12" -babel==2.13.0 ; python_version >= "3.7" and python_version < "3.12" +babel==2.13.1 ; python_version >= "3.7" and python_version < "3.12" billiard==3.6.4.0 ; python_version >= "3.7" and python_version < "3.12" black==23.3.0 ; python_version >= "3.7" and python_version < "3.12" bleach==6.0.0 ; python_version >= "3.7" and python_version < "3.12" @@ -18,7 +18,7 @@ cached-property==1.5.2 ; python_version >= "3.7" and python_version < "3.8" celery==5.2.7 ; python_version >= "3.7" and python_version < "3.12" certifi==2023.7.22 ; python_version >= "3.7" and python_version < "3.12" cffi==1.15.1 ; python_version >= "3.7" and python_version < "3.12" -charset-normalizer==3.3.0 ; python_version >= "3.7" and python_version < "3.12" +charset-normalizer==3.3.1 ; python_version >= "3.7" and python_version < "3.12" click-didyoumean==0.3.0 ; python_version >= "3.7" and python_version < "3.12" click-plugins==1.1.1 ; python_version >= "3.7" and python_version < "3.12" click-repl==0.3.0 ; python_version >= "3.7" and python_version < "3.12" @@ -26,7 +26,7 @@ click==8.1.7 ; python_version >= "3.7" and python_version < "3.12" codespell==2.2.5 ; python_version >= "3.7" and python_version < "3.12" colorama==0.4.6 ; python_version >= "3.7" and python_version < "3.12" and (sys_platform == "win32" or platform_system == "Windows" or os_name == "nt") coverage[toml]==7.2.7 ; python_version >= "3.7" and python_version < "3.12" -cryptography==41.0.4 ; python_version >= "3.7" and python_version < "3.12" +cryptography==41.0.5 ; python_version >= "3.7" and python_version < "3.12" cwltest==2.3.20230825125225 ; python_version >= "3.7" and python_version < "3.12" cycler==0.11.0 ; python_version >= "3.7" and python_version < "3.12" darker==1.7.2 ; python_version >= "3.7" and python_version < "3.12" @@ -77,7 +77,7 @@ myst-parser==1.0.0 ; python_version >= "3.7" and python_version < "3.12" numpy==1.21.6 ; python_version >= "3.7" and python_version < "3.8" numpy==1.24.4 ; python_version >= "3.8" and python_version < "3.9" numpy==1.26.1 ; python_version >= "3.9" and python_version < "3.12" -outcome==1.3.0 ; python_version >= "3.7" and python_version < "3.12" +outcome==1.3.0.post0 ; python_version >= "3.7" and python_version < "3.12" packaging==23.2 ; python_version >= "3.7" and python_version < "3.12" pathspec==0.11.2 ; python_version >= "3.7" and python_version < "3.12" pillow==9.5.0 ; python_version >= "3.7" and python_version < "3.12" @@ -112,7 +112,7 @@ pytest-mock==3.11.1 ; python_version >= "3.7" and python_version < "3.12" pytest-playwright==0.3.3 ; python_version >= "3.7" and python_version < "3.12" pytest-postgresql==4.1.1 ; python_version >= "3.7" and python_version < "3.12" pytest-shard==0.1.2 ; python_version >= "3.7" and python_version < "3.12" -pytest==7.4.2 ; python_version >= "3.7" and python_version < "3.12" +pytest==7.4.3 ; python_version >= "3.7" and python_version < "3.12" python-dateutil==2.8.2 ; python_version >= "3.7" and python_version < "3.12" python-irodsclient==1.1.9 ; python_version >= "3.7" and python_version < "3.12" python-slugify==8.0.1 ; python_version >= "3.7" and python_version < "3.12" diff --git a/lib/galaxy/dependencies/pinned-lint-requirements.txt b/lib/galaxy/dependencies/pinned-lint-requirements.txt index b2478f72eb60..3d894f393d0b 100644 --- a/lib/galaxy/dependencies/pinned-lint-requirements.txt +++ b/lib/galaxy/dependencies/pinned-lint-requirements.txt @@ -5,6 +5,6 @@ importlib-metadata==4.2.0 mccabe==0.7.0 pycodestyle==2.9.1 pyflakes==2.5.0 -ruff==0.1.1 +ruff==0.1.3 typing_extensions==4.7.1 zipp==3.15.0 diff --git a/lib/galaxy/dependencies/pinned-requirements.txt b/lib/galaxy/dependencies/pinned-requirements.txt index eaebd043c2cf..f7c83edfef01 100644 --- a/lib/galaxy/dependencies/pinned-requirements.txt +++ b/lib/galaxy/dependencies/pinned-requirements.txt @@ -6,7 +6,7 @@ aiofiles==23.2.1 ; python_version >= "3.7" and python_version < "3.12" aiohttp==3.8.6 ; python_version >= "3.7" and python_version < "3.12" aioitertools==0.11.0 ; python_version >= "3.7" and python_version < "3.12" aiosignal==1.3.1 ; python_version >= "3.7" and python_version < "3.12" -alembic==1.12.0 ; python_version >= "3.7" and python_version < "3.12" +alembic==1.12.1 ; python_version >= "3.7" and python_version < "3.12" amqp==5.1.1 ; python_version >= "3.7" and python_version < "3.12" aniso8601==9.0.1 ; python_version >= "3.7" and python_version < "3.12" anyio==3.7.1 ; python_version >= "3.7" and python_version < "3.12" @@ -18,7 +18,7 @@ async-timeout==4.0.3 ; python_version >= "3.7" and python_version < "3.12" asynctest==0.13.0 ; python_version >= "3.7" and python_version < "3.8" attmap==0.13.2 ; python_version >= "3.7" and python_version < "3.12" attrs==23.1.0 ; python_version >= "3.7" and python_version < "3.12" -babel==2.13.0 ; python_version >= "3.7" and python_version < "3.12" +babel==2.13.1 ; python_version >= "3.7" and python_version < "3.12" backports-zoneinfo==0.2.1 ; python_version >= "3.7" and python_version < "3.9" bagit-profile==1.3.1 ; python_version >= "3.7" and python_version < "3.12" bagit==1.8.1 ; python_version >= "3.7" and python_version < "3.12" @@ -37,7 +37,7 @@ cached-property==1.5.2 ; python_version >= "3.7" and python_version < "3.8" celery==5.2.7 ; python_version >= "3.7" and python_version < "3.12" certifi==2023.7.22 ; python_version >= "3.7" and python_version < "3.12" cffi==1.15.1 ; python_version >= "3.7" and python_version < "3.12" -charset-normalizer==3.3.0 ; python_version >= "3.7" and python_version < "3.12" +charset-normalizer==3.3.1 ; python_version >= "3.7" and python_version < "3.12" cheetah3==3.2.6.post1 ; python_version >= "3.7" and python_version < "3.12" circus==0.18.0 ; python_version >= "3.7" and python_version < "3.12" click-didyoumean==0.3.0 ; python_version >= "3.7" and python_version < "3.12" @@ -49,7 +49,7 @@ cloudbridge==3.2.0 ; python_version >= "3.7" and python_version < "3.12" colorama==0.4.6 ; python_version >= "3.7" and python_version < "3.12" and platform_system == "Windows" coloredlogs==15.0.1 ; python_version >= "3.7" and python_version < "3.12" conda-package-streaming==0.9.0 ; python_version >= "3.7" and python_version < "3.12" -cryptography==41.0.4 ; python_version >= "3.7" and python_version < "3.12" +cryptography==41.0.5 ; python_version >= "3.7" and python_version < "3.12" cwl-upgrader==1.2.8 ; python_version >= "3.7" and python_version < "3.12" cwl-utils==0.28 ; python_version >= "3.7" and python_version < "3.12" cwltool==3.1.20221109155812 ; python_version >= "3.7" and python_version < "3.12" diff --git a/lib/galaxy/dependencies/pinned-typecheck-requirements.txt b/lib/galaxy/dependencies/pinned-typecheck-requirements.txt index acd6fff7f0ad..afecd6cafdff 100644 --- a/lib/galaxy/dependencies/pinned-typecheck-requirements.txt +++ b/lib/galaxy/dependencies/pinned-typecheck-requirements.txt @@ -1,5 +1,5 @@ cffi==1.15.1 ; python_version >= "3.7" and python_version < "3.12" -cryptography==41.0.4 ; python_version >= "3.7" and python_version < "3.12" +cryptography==41.0.5 ; python_version >= "3.7" and python_version < "3.12" mypy-extensions==1.0.0 ; python_version >= "3.7" and python_version < "3.12" mypy==1.4.1 ; python_version >= "3.7" and python_version < "3.12" pycparser==2.21 ; python_version >= "3.7" and python_version < "3.12"