Fix B018 errors reported by flake8-bugbear 23.12.2

galaxybot · Dec 11, 2023 · 9339fb3 · 9339fb3
1 parent 65f1633
commit 9339fb3
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Showing 2 changed files with 4 additions and 4 deletions.
diff --git a/lib/galaxy/config_watchers.py b/lib/galaxy/config_watchers.py
@@ -31,13 +31,13 @@ def reload_toolbox():
             try:
                 # Run and wait for toolbox reload on the process that watches the config files.
                 # The toolbox reload will update the integrated_tool_panel_file
-                self.app.queue_worker.send_local_control_task("reload_toolbox", get_response=True),
+                self.app.queue_worker.send_local_control_task("reload_toolbox", get_response=True)
             except Exception:
                 save_integrated_tool_panel = True
                 log.exception("Exception occured while reloading toolbox")
             self.app.queue_worker.send_control_task(
                 "reload_toolbox", noop_self=True, kwargs={"save_integrated_tool_panel": save_integrated_tool_panel}
-            ),
+            )
 
         self.tool_config_watcher = get_tool_conf_watcher(
             reload_callback=reload_toolbox,

diff --git a/scripts/microbes/harvest_bacteria.py b/scripts/microbes/harvest_bacteria.py
@@ -79,17 +79,17 @@ def get_chroms_by_project_id(
 ):
     html_count = 0
     html = None
+    url = f"{base_url}{org_num}"
     while html_count < 500 and html is None:
         html_count += 1
-        url = f"{base_url}{org_num}"
         try:
             html = requests.get(url).text
         except Exception:
             print("GENOME PROJECT FAILED:", html_count, "org:", org_num, url)
             html = None
             time.sleep(1)  # Throttle Connection
     if html is None:
-        "GENOME PROJECT COMPLETELY FAILED TO LOAD", "org:", org_num, "http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=genomeprj&cmd=Retrieve&dopt=Overview&list_uids=" + org_num
+        print("GENOME PROJECT COMPLETELY FAILED TO LOAD", "org:", org_num, url)
         return None
 
     chroms = []