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Update Python dependencies
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by running `make update-dependencies`.
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@galaxybot @nsoranzo
galaxybot authored and nsoranzo committed Oct 27, 2024
1 parent b2c9f19 commit c721a33
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Showing 4 changed files with 23 additions and 23 deletions.
10 changes: 5 additions & 5 deletions lib/galaxy/dependencies/dev-requirements.txt
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Expand Up @@ -40,10 +40,10 @@ exceptiongroup==1.2.2 ; python_version >= "3.8" and python_version < "3.11"
filelock==3.16.1 ; python_version >= "3.8" and python_version < "3.13"
fluent-logger==0.11.1 ; python_version >= "3.8" and python_version < "3.13"
fonttools==4.54.1 ; python_version >= "3.8" and python_version < "3.13"
frozenlist==1.4.1 ; python_version >= "3.8" and python_version < "3.13"
frozenlist==1.5.0 ; python_version >= "3.8" and python_version < "3.13"
galaxy-release-util==0.1.11 ; python_version >= "3.8" and python_version < "3.13"
graylint==1.1.1 ; python_version >= "3.8" and python_version < "3.13"
greenlet==3.0.3 ; python_version >= "3.8" and python_version < "3.13"
greenlet==3.1.1 ; python_version >= "3.8" and python_version < "3.13"
h11==0.14.0 ; python_version >= "3.8" and python_version < "3.13"
httpcore==1.0.6 ; python_version >= "3.8" and python_version < "3.13"
httpx==0.27.2 ; python_version >= "3.8" and python_version < "3.13"
Expand Down Expand Up @@ -93,7 +93,7 @@ pillow==10.4.0 ; python_version >= "3.8" and python_version < "3.13"
pkce==1.0.3 ; python_version >= "3.8" and python_version < "3.13"
pkginfo==1.10.0 ; python_version >= "3.8" and python_version < "3.13"
platformdirs==4.3.6 ; python_version >= "3.8" and python_version < "3.13"
playwright==1.47.0 ; python_version >= "3.8" and python_version < "3.13"
playwright==1.48.0 ; python_version >= "3.8" and python_version < "3.13"
pluggy==1.5.0 ; python_version >= "3.8" and python_version < "3.13"
port-for==0.7.3 ; python_version >= "3.8" and python_version < "3.13"
prettytable==3.11.0 ; python_version >= "3.8" and python_version < "3.13"
Expand Down Expand Up @@ -134,7 +134,7 @@ requests-toolbelt==1.0.0 ; python_version >= "3.8" and python_version < "3.13"
requests==2.32.3 ; python_version >= "3.8" and python_version < "3.13"
responses==0.25.3 ; python_version >= "3.8" and python_version < "3.13"
rfc3986==2.0.0 ; python_version >= "3.8" and python_version < "3.13"
rich==13.9.2 ; python_version >= "3.8" and python_version < "3.13"
rich==13.9.3 ; python_version >= "3.8" and python_version < "3.13"
rpds-py==0.20.0 ; python_version >= "3.9" and python_version < "3.13"
ruamel-yaml-clib==0.2.8 ; platform_python_implementation == "CPython" and python_version < "3.13" and python_version >= "3.8"
ruamel-yaml==0.18.6 ; python_version >= "3.8" and python_version < "3.13"
Expand Down Expand Up @@ -181,7 +181,7 @@ urllib3[socks]==1.26.20 ; python_version >= "3.8" and python_version < "3.13"
watchdog==4.0.2 ; python_version >= "3.8" and python_version < "3.13"
wcwidth==0.2.13 ; python_version >= "3.8" and python_version < "3.13"
websocket-client==1.8.0 ; python_version >= "3.8" and python_version < "3.13"
werkzeug==3.0.4 ; python_version >= "3.8" and python_version < "3.13"
werkzeug==3.0.6 ; python_version >= "3.8" and python_version < "3.13"
wrapt==1.16.0 ; python_version >= "3.8" and python_version < "3.13"
wsproto==1.2.0 ; python_version >= "3.8" and python_version < "3.13"
yarl==1.15.2 ; python_version >= "3.8" and python_version < "3.13"
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2 changes: 1 addition & 1 deletion lib/galaxy/dependencies/pinned-lint-requirements.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -4,4 +4,4 @@ flake8-bugbear==24.8.19
mccabe==0.7.0
pycodestyle==2.12.1
pyflakes==3.2.0
ruff==0.7.0
ruff==0.7.1
20 changes: 10 additions & 10 deletions lib/galaxy/dependencies/pinned-requirements.txt
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Expand Up @@ -65,19 +65,19 @@ dparse==0.6.3 ; python_version >= "3.8" and python_version < "3.13"
edam-ontology==1.25.2 ; python_version >= "3.8" and python_version < "3.13"
email-validator==2.2.0 ; python_version >= "3.8" and python_version < "3.13"
exceptiongroup==1.2.2 ; python_version >= "3.8" and python_version < "3.11"
fastapi-slim==0.115.2 ; python_version >= "3.8" and python_version < "3.13"
fastapi-slim==0.115.3 ; python_version >= "3.8" and python_version < "3.13"
filelock==3.16.1 ; python_version >= "3.8" and python_version < "3.13"
frozenlist==1.4.1 ; python_version >= "3.8" and python_version < "3.13"
frozenlist==1.5.0 ; python_version >= "3.8" and python_version < "3.13"
fs==2.4.16 ; python_version >= "3.8" and python_version < "3.13"
fsspec==2024.9.0 ; python_version >= "3.8" and python_version < "3.13"
fsspec==2024.10.0 ; python_version >= "3.8" and python_version < "3.13"
future==1.0.0 ; python_version >= "3.8" and python_version < "3.13"
galaxy2cwl==0.1.4 ; python_version >= "3.8" and python_version < "3.13"
graphene-sqlalchemy==3.0.0rc1 ; python_version >= "3.8" and python_version < "3.13"
graphene==3.4 ; python_version >= "3.8" and python_version < "3.13"
graphql-core==3.2.5 ; python_version >= "3.8" and python_version < "3.13"
graphql-relay==3.2.0 ; python_version >= "3.8" and python_version < "3.13"
gravity==1.0.6 ; python_version >= "3.8" and python_version < "3.13"
greenlet==3.0.3 ; python_version < "3.13" and (platform_machine == "aarch64" or platform_machine == "ppc64le" or platform_machine == "x86_64" or platform_machine == "amd64" or platform_machine == "AMD64" or platform_machine == "win32" or platform_machine == "WIN32") and python_version >= "3.8"
greenlet==3.1.1 ; python_version < "3.13" and (platform_machine == "aarch64" or platform_machine == "ppc64le" or platform_machine == "x86_64" or platform_machine == "amd64" or platform_machine == "AMD64" or platform_machine == "win32" or platform_machine == "WIN32") and python_version >= "3.8"
gunicorn==23.0.0 ; python_version >= "3.8" and python_version < "3.13"
gxformat2==0.20.0 ; python_version >= "3.8" and python_version < "3.13"
h11==0.14.0 ; python_version >= "3.8" and python_version < "3.13"
Expand All @@ -99,7 +99,7 @@ jsonschema==4.23.0 ; python_version >= "3.8" and python_version < "3.13"
kombu==5.4.2 ; python_version >= "3.8" and python_version < "3.13"
lagom==2.6.0 ; python_version >= "3.8" and python_version < "3.13"
lxml==5.3.0 ; python_version >= "3.8" and python_version < "3.13"
mako==1.3.5 ; python_version >= "3.8" and python_version < "3.13"
mako==1.3.6 ; python_version >= "3.8" and python_version < "3.13"
markdown-it-py==3.0.0 ; python_version >= "3.8" and python_version < "3.13"
markdown==3.7 ; python_version >= "3.8" and python_version < "3.13"
markupsafe==2.1.5 ; python_version >= "3.8" and python_version < "3.13"
Expand All @@ -117,7 +117,7 @@ numpy==1.24.4 ; python_version >= "3.8" and python_version < "3.9"
numpy==2.0.2 ; python_version >= "3.9" and python_version < "3.10"
numpy==2.1.2 ; python_version >= "3.10" and python_version < "3.13"
oauthlib==3.2.2 ; python_version >= "3.8" and python_version < "3.13"
orjson==3.10.7 ; python_version >= "3.8" and python_version < "3.13"
orjson==3.10.10 ; python_version >= "3.8" and python_version < "3.13"
oyaml==1.0 ; python_version >= "3.8" and python_version < "3.13"
packaging==24.1 ; python_version >= "3.8" and python_version < "3.13"
paramiko==3.5.0 ; python_version >= "3.8" and python_version < "3.13"
Expand Down Expand Up @@ -167,13 +167,13 @@ requests-oauthlib==2.0.0 ; python_version >= "3.8" and python_version < "3.13"
requests-toolbelt==1.0.0 ; python_version >= "3.8" and python_version < "3.13"
requests-unixsocket==0.3.0 ; python_version >= "3.8" and python_version < "3.13"
requests==2.32.3 ; python_version >= "3.8" and python_version < "3.13"
rich==13.9.2 ; python_version >= "3.8" and python_version < "3.13"
rich==13.9.3 ; python_version >= "3.8" and python_version < "3.13"
rocrate==0.11.0 ; python_version >= "3.8" and python_version < "3.13"
routes==2.5.1 ; python_version >= "3.8" and python_version < "3.13"
rpds-py==0.20.0 ; python_version >= "3.8" and python_version < "3.13"
ruamel-yaml-clib==0.2.8 ; platform_python_implementation == "CPython" and python_version < "3.13" and python_version >= "3.8"
ruamel-yaml==0.18.6 ; python_version >= "3.8" and python_version < "3.13"
s3fs==2024.9.0 ; python_version >= "3.8" and python_version < "3.13"
s3fs==2024.10.0 ; python_version >= "3.8" and python_version < "3.13"
schema-salad==8.7.20241010092723 ; python_version >= "3.8" and python_version < "3.13"
setuptools-scm==5.0.2 ; python_version >= "3.8" and python_version < "3.13"
setuptools==75.2.0 ; python_version >= "3.8" and python_version < "3.13"
Expand All @@ -187,7 +187,7 @@ sqlitedict==2.1.0 ; python_version >= "3.8" and python_version < "3.13"
sqlparse==0.5.1 ; python_version >= "3.8" and python_version < "3.13"
starlette-context==0.3.6 ; python_version >= "3.8" and python_version < "3.13"
starlette-graphene3==0.6.0 ; python_version >= "3.8" and python_version < "3.13"
starlette==0.40.0 ; python_version >= "3.8" and python_version < "3.13"
starlette==0.41.0 ; python_version >= "3.8" and python_version < "3.13"
supervisor==4.2.5 ; python_version >= "3.8" and python_version < "3.13"
svgwrite==1.4.3 ; python_version >= "3.8" and python_version < "3.13"
tenacity==9.0.0 ; python_version >= "3.8" and python_version < "3.13"
Expand All @@ -208,7 +208,7 @@ uvloop==0.21.0 ; python_version >= "3.8" and python_version < "3.13"
vine==5.1.0 ; python_version >= "3.8" and python_version < "3.13"
wcwidth==0.2.13 ; python_version >= "3.8" and python_version < "3.13"
webencodings==0.5.1 ; python_version >= "3.8" and python_version < "3.13"
webob==1.8.8 ; python_version >= "3.8" and python_version < "3.13"
webob==1.8.9 ; python_version >= "3.8" and python_version < "3.13"
whoosh==2.7.4 ; python_version >= "3.8" and python_version < "3.13"
wrapt==1.16.0 ; python_version >= "3.8" and python_version < "3.13"
yacman==0.9.3 ; python_version >= "3.8" and python_version < "3.13"
Expand Down
14 changes: 7 additions & 7 deletions lib/galaxy/dependencies/pinned-typecheck-requirements.txt
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Original file line number Diff line number Diff line change
@@ -1,19 +1,19 @@
annotated-types==0.7.0 ; python_version >= "3.8" and python_version < "3.13"
boto3-stubs[s3]==1.35.44 ; python_version >= "3.8" and python_version < "3.13"
botocore-stubs==1.35.44 ; python_version >= "3.8" and python_version < "3.13"
boto3-stubs[s3]==1.35.49 ; python_version >= "3.8" and python_version < "3.13"
botocore-stubs==1.35.49 ; python_version >= "3.8" and python_version < "3.13"
cffi==1.17.1 ; python_version >= "3.8" and python_version < "3.13" and platform_python_implementation != "PyPy"
cryptography==43.0.3 ; python_version >= "3.8" and python_version < "3.13"
lxml-stubs==0.5.1 ; python_version >= "3.8" and python_version < "3.13"
mypy-boto3-s3==1.35.42 ; python_version >= "3.8" and python_version < "3.13"
mypy-boto3-s3==1.35.46 ; python_version >= "3.8" and python_version < "3.13"
mypy-extensions==1.0.0 ; python_version >= "3.8" and python_version < "3.13"
mypy==1.12.0 ; python_version >= "3.8" and python_version < "3.13"
mypy==1.13.0 ; python_version >= "3.8" and python_version < "3.13"
pycparser==2.22 ; python_version >= "3.8" and python_version < "3.13" and platform_python_implementation != "PyPy"
pydantic-core==2.23.4 ; python_version >= "3.8" and python_version < "3.13"
pydantic==2.9.2 ; python_version >= "3.8" and python_version < "3.13"
tomli==2.0.2 ; python_version >= "3.8" and python_version < "3.11"
types-awscrt==0.22.0 ; python_version >= "3.8" and python_version < "3.13"
types-awscrt==0.23.0 ; python_version >= "3.8" and python_version < "3.13"
types-bleach==6.1.0.20240331 ; python_version >= "3.8" and python_version < "3.13"
types-boto==2.49.18.20240806 ; python_version >= "3.8" and python_version < "3.13"
types-boto==2.49.18.20241019 ; python_version >= "3.8" and python_version < "3.13"
types-contextvars==2.4.7.3 ; python_version >= "3.8" and python_version < "3.13"
types-dataclasses==0.6.6 ; python_version >= "3.8" and python_version < "3.13"
types-docutils==0.21.0.20241005 ; python_version >= "3.8" and python_version < "3.13"
Expand All @@ -24,7 +24,7 @@ types-python-dateutil==2.9.0.20241003 ; python_version >= "3.8" and python_versi
types-pyyaml==6.0.12.20240917 ; python_version >= "3.8" and python_version < "3.13"
types-requests==2.31.0.6 ; python_version >= "3.8" and python_version < "3.13"
types-s3transfer==0.10.3 ; python_version >= "3.8" and python_version < "3.13"
types-setuptools==75.2.0.20241019 ; python_version >= "3.8" and python_version < "3.13"
types-setuptools==75.2.0.20241025 ; python_version >= "3.8" and python_version < "3.13"
types-six==1.16.21.20241009 ; python_version >= "3.8" and python_version < "3.13"
types-urllib3==1.26.25.14 ; python_version >= "3.8" and python_version < "3.13"
typing-extensions==4.12.2 ; python_version >= "3.8" and python_version < "3.13"

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