From af8513cdda8081258cee610973c4dea581f958b3 Mon Sep 17 00:00:00 2001
From: Clea Siguret <clea.siguret@gmail.com>
Date: Fri, 27 Sep 2024 11:45:27 +0200
Subject: [PATCH] Fix test for 5 outputs

---
 .../bacterial_genome_annotation-tests.yml     | 22 +++++++++----------
 1 file changed, 11 insertions(+), 11 deletions(-)

diff --git a/workflows/bacterial_genomics/bacterial_genome_annotation/bacterial_genome_annotation-tests.yml b/workflows/bacterial_genomics/bacterial_genome_annotation/bacterial_genome_annotation-tests.yml
index c8e82d490..15aeb2599 100644
--- a/workflows/bacterial_genomics/bacterial_genome_annotation/bacterial_genome_annotation-tests.yml
+++ b/workflows/bacterial_genomics/bacterial_genome_annotation/bacterial_genome_annotation-tests.yml
@@ -13,28 +13,28 @@
           text: "Writing out results for replicon"
     integronfinder2_summary:
       asserts:
-        has_n_columns:
-          n: 6
+        has_text:
+          text: "contig00001"
     integronfinder2_results_tabular:
       asserts:
-        has_n_columns:
-          n: 14
+        has_text:
+          text: "contig00009_42"
     bakta_hypothetical_tabular:
       asserts:
-        has_n_columns:
-          n: 9
+        has_text:
+          text: "DHJLLP_04750"
     bakta_annotation_json:
       asserts:
         has_text:
           text: "aa_hexdigest"
     bakta_annotation_tabular:
       asserts:
-        has_n_columns:
-          n: 9
+        has_text:
+          text: "Phosphotransferase system cellobiose-specific component IIC"
     isescan_results_tabular:
       asserts:
-        has_n_columns:
-          n: 24
+        has_text:
+          text: "IS256_162"
     isescan_summary_tabular:
       asserts:
         has_text:
@@ -58,4 +58,4 @@
         has_text:
           text: "CALIN"
         has_text:
-          text: "insertion_sequence"
+          text: "PFAM"