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Updating tools/gtdbtk from version 1.7.0 to 2.4.0 #5012

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Updating tools/gtdbtk from version 1.7.0 to 2.4.0 #5012

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ee59db3
Updating tools/gtdbtk from version 2.3.2 to 2.4.0
Sep 26, 2024
8fc8bbd
Change expected db version
bebatut Sep 26, 2024
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2 changes: 1 addition & 1 deletion tools/gtdbtk/gtdbtk_classify_wf.xml
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Original file line number Diff line number Diff line change
Expand Up @@ -39,7 +39,7 @@ $advanced.force
<param name="input" type="data" format="fasta,fasta.gz" multiple="true" label="Fasta (Genome) files"/>
<param name="gtdbtk_db" type="select" label="GTDB-Tk database" help="This version of GTDB-Tk requires GTDB version 207 or 214. Please contact your service administrator if this version is not available to select.">
<options from_data_table="gtdbtk_database_versioned">
<filter type="regexp" column="version" value="^2(07|14)$"/>
<filter type="regexp" column="version" value="^220$"/>
<validator type="no_options" message="No locally cached GTDB-Tk database is available"/>
</options>
</param>
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4 changes: 2 additions & 2 deletions tools/gtdbtk/macros.xml
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@@ -1,6 +1,6 @@
<macros>
<token name="@TOOL_VERSION@">2.3.2</token>
<token name="@VERSION_SUFFIX@">5</token>
<token name="@TOOL_VERSION@">2.4.0</token>
<token name="@VERSION_SUFFIX@">0</token>
<token name="@PROFILE@">22.05</token>
<xml name="requirements">
<requirements>
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