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Add Spapros #6191
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Add Spapros #6191
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2ea6757
add evaluation.xml
heylf 9cf03aa
first version of macros.xml
heylf fdff2ae
first version of shed.yml
heylf 8553dbf
adding second test to evaluation
heylf 858d29a
finished evaluation tool, ready for review
heylf 4b6e112
Changes to shed.yml
heylf bf3b870
some fixes and code improvements for evaluatio.xml
heylf 0690561
fix typo in macros.xml
heylf af5eddb
Adding selection.xml for spapros selction
heylf 253fccb
adding test data for spapros
heylf 07fd5a1
Merge branch 'galaxyproject:main' into spapros
heylf 99cb838
change to 240cells data evaluation.xml
heylf 7ebe909
changes to selection.xml to optimize tests
heylf 172dae2
optimize test data
heylf b651010
Review changed to evaluation.xml
heylf 3784f80
Review changes to macros.xml
heylf 71140ff
Review changes to selection.xml
heylf 7c72a2f
adding image asserts
heylf b8447be
Update tools/spapros/selection.xml
bgruening 620b98a
Update selection.xml
bgruening c08e695
synthax fix selection.xml
heylf 6d5ed41
Merge branch 'spapros' of https://github.com/heylf/tools-iuc into spa…
heylf 934c8a0
bugfix selection.xml
heylf 8bc658d
changes to marker_out_test4.tsv
heylf 2748ce4
solving issue with line switches of marker files
heylf 0219dd0
fix to slection.xml tests
heylf 1b71a09
changes to ci and pr yaml to take tifffile into account
heylf 2b80379
Revert "changes to ci and pr yaml to take tifffile into account"
heylf 13d705d
Merge branch 'main' into spapros
bgruening d0babbe
Merge branch 'main' into spapros
bgruening 531e301
remove file comparisions
bgruening 7a2ff46
rsolve merge conflict for selection.xml
heylf bfd0244
resolve assert for evaluation.xml
heylf 4562f31
remove pngs
heylf fe3e50a
bugfix selection.xml
heylf 155273d
updating marker_out.tsvs
heylf 34c52ca
fixing image differnece for slection.xml
heylf 925a569
fixing image differnece for slection.xml
heylf 581b88a
fix typo
heylf 24033e2
figuring out reproducibility isse
heylf 090b6b9
Try to fix reproducibility issue
heylf 61333c2
Try to fix reproducibility issue
heylf d5b3878
Try to fix reproducibility issue
heylf 5fcd4ea
Try to fix reproducibility issue
heylf 57821d9
figureing out what is going on
heylf dc2eb3b
figureing out what is going on
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,11 @@ | ||
| 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 | ||
| CD14+ Monocyte FTL FCER1G | ||
| CD19+ B ISG20 LY86 | ||
| CD34+ PRSS57 SNHG7 | ||
| CD4+/CD25 T Reg SIT1 IL32 | ||
| CD4+/CD45RO+ Memory GZMK IL32 CD3E | ||
| CD56+ NK CD7 GNLY | ||
| CD8+ Cytotoxic T CCL5 S100A4 NKG7 | ||
| CD8+/CD45RA+ Naive Cytotoxic CD7 CD8A CD8B AES | ||
| Dendritic CD74 LYZ | ||
| Unkown LTB CD247 SERPINB1 RPLP1 TNFRSF13B BLK SPON2 TPD52 RNF138 NUCB2 CD27 AMICA1 BTG1 CD63 HOPX PTPRCAP CPVL JUN RAB3IP SPOCK2 PRF1 GZMA STK17A RPL3 GYPC SOX4 GZMH LINC00402 C9orf142 VIMP DENND2D | ||
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Wow, what is that? Its now green, but this file looks wired.
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you mean the empty value for some rows? thats how it suppose to be.