diff --git a/GEOImporter.pdf b/GEOImporter.pdf index 359ed64..7ca7569 100644 Binary files a/GEOImporter.pdf and b/GEOImporter.pdf differ diff --git a/manifest b/manifest index 685c3e6..b31ec57 100644 --- a/manifest +++ b/manifest @@ -5,6 +5,7 @@ cpuType=any description=Imports data from the Gene Expression Omnibus (GEO) fileFormat=gct job.docker.image=jupyter/datascience-notebook\:r-4.0.3 +src.repo=https://github.com/genepattern/GEOImporter JVMLevel= language=any LSID=urn\:lsid\:broad.mit.edu\:cancer.software.genepattern.module.analysis\:00042\:5.1 @@ -100,8 +101,8 @@ p11_value= privacy=public publicationDate=11/01/2007 20\:31 quality=production -requiredPatchLSIDs=urn\:lsid\:broad.mit.edu\:cancer.software.genepattern.server.patch\:00009\:1 -requiredPatchURLs=http\://www.broad.mit.edu/webservices/gpModuleRepository/download/prod/patch/?file\=/R_2_5_Check/broad.mit.edu\:cancer.software.genepattern.server.patch/00009/1/R2_5.zip +#requiredPatchLSIDs=urn\:lsid\:broad.mit.edu\:cancer.software.genepattern.server.patch\:00009\:1 +#requiredPatchURLs=http\://www.broad.mit.edu/webservices/gpModuleRepository/download/prod/patch/?file\=/R_2_5_Check/broad.mit.edu\:cancer.software.genepattern.server.patch/00009/1/R2_5.zip taskType=Preprocess & Utilities userid=GenePattern -version=Updated for R 4.0.3 - updated doc for beta release +version=PR 4 from Anthony - Omit NA option - remove requiredPatches