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Issues: genome/pindel

71 Open 14 Closed
71 Open 14 Closed
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Issues list

how to get allele frequencies with Pindel?
#117 opened Dec 20, 2019 by myourshaw
pindel fails with error while loading shared libraries: libhts.so.3
#116 opened Dec 19, 2019 by myourshaw
1
Installing Pindel keeps failing because of htslib
#115 opened Dec 2, 2019 by claudiadast
1
NTLEN definition in pindel2vcf4tcga output
#114 opened Nov 13, 2019 by abolia
Clarification on running pindel on individual samples
#113 opened Oct 15, 2019 by ashokrags
Large TDs spanning the window size lose supporting reads
#112 opened Oct 2, 2019 by RobinVanSchendel
Problems in installing pindel
#111 opened Aug 29, 2019 by thejadeR
2
CRAM index support
#110 opened Jul 8, 2019 by neilgoodgame
Duplicate entries in Pindel output
#109 opened Jul 5, 2019 by stevekm
Where can i find the demo results?
#108 opened Jul 4, 2019 by CapitanFlint
Long runtime
#107 opened Jul 1, 2019 by David-Flurin
How does pindel detect large insert
#105 opened Apr 22, 2019 by liufy11
strategies used by pindel to detect variants
#104 opened Mar 5, 2019 by Jordi-V
Question about speed
#103 opened Jan 16, 2019 by tiplud
Confusion about documentation about parameter -c
#100 opened Sep 17, 2018 by SHuang-Broad
1
Building pindel with g++-7.3.0 fails
#99 opened Sep 17, 2018 by SHuang-Broad
9
pindel install fail
#98 opened Sep 7, 2018 by wang-xilu
6
Pindel understimates AF
#97 opened Aug 22, 2018 by erfan1985
The output format of pindel
#96 opened Aug 1, 2018 by zhangnan0107
wrong VAF estimation of pindel
#95 opened Jul 10, 2018 by jinxinhao0627
2
Error in compiling from master -- pindel.cpp:1557:127: error: call of overloaded ‘abs(unsigned int)’ is ambiguous
#87 opened Mar 21, 2018 by eroberson
3
Possible enhancement for VAF estimation
#86 opened Mar 21, 2018 by philip-holmgren
Cram file support?
#85 opened Feb 26, 2018 by jjfarrell
1
Build error with gcc 6, 7
#83 opened Feb 13, 2018 by jgarthur
Insert size must be an integer
#81 opened Jan 4, 2018 by dariober
1
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