build.gradle

apply plugin: 'java'
apply plugin: 'eclipse-wtp'
apply plugin: 'pl.allegro.tech.build.axion-release'

project('gluetools-core') {
    apply plugin: 'java'
    apply plugin: 'eclipse-wtp'
    apply plugin: 'maven-publish'
    apply plugin: 'com.bmuschko.docker-remote-api'
}

project('gluetools-mysql-docker') {
    apply plugin: 'java'
    apply plugin: 'com.bmuschko.docker-remote-api'
}

project('gluetools-ws') {
    apply plugin: 'war'
    apply plugin: 'java'
    apply plugin: 'eclipse-wtp'
    apply plugin: 'maven-publish'
}

project('gluetools-web') {
    apply plugin: 'war'
    apply plugin: 'maven-publish'
}

project('gluetoolsApp') {
    apply plugin: 'war'
}

// Unified deployment task
task deployAll(dependsOn: [
    ':gluetools-core:install',
    ':gluetools-web:install',
    ':gluetools-ws:install',
    ':gluetoolsApp:cargoRedeployRemote',
    ':gluetools-mysql-docker:buildMySqlDockerImage',
    ':gluetools-mysql-docker:pushMySqlDockerImage',
    ':gluetools-core:buildCoreDockerImage',
    ':gluetools-core:pushCoreDockerImage',
]) {
}

configure(subprojects.findAll { it.name != 'gluetools-web' }) {

    dependencies {
        implementation group: 'org.apache.httpcomponents', name: 'httpclient', version: '4.4.1'
        implementation group: 'org.apache.cayenne', name: 'cayenne-server', version: '3.1.1'
        implementation group: 'org.apache.cayenne', name: 'cayenne-project', version: '3.1.1'
        implementation group: 'commons-io', name: 'commons-io', version: '1.3.2'
        implementation group: 'org.freemarker', name: 'freemarker', version: '2.3.25-incubating'
        implementation group: 'commons-collections', name: 'commons-collections', version: '3.2'
        implementation group: 'mysql', name: 'mysql-connector-java', version: '8.0.13'
        implementation group: 'jline', name: 'jline', version: '2.14.5'
        implementation group: 'com.brsanthu', name: 'data-exporter', version: '1.0.4'
        implementation group: 'com.offbytwo', name: 'docopt', version: '0.6.0.20150202'
        implementation group: 'javax.json', name: 'javax.json-api', version: '1.0'
        implementation group: 'org.glassfish', name: 'javax.json', version: '1.0.4'
        implementation group: 'com.github.samtools', name: 'htsjdk', version: '2.0.1'
        implementation group: 'net.sf.trove4j', name: 'trove4j', version: '3.0.3'
        implementation group: 'org.apache.commons', name: 'commons-lang3', version: '3.0'
        implementation group: 'org.apache.bcel', name: 'bcel', version: '6.0'
        implementation group: 'org.slf4j', name: 'slf4j-nop', version: '1.7.0'

        annotationProcessor group: 'org.apache.logging.log4j', name: 'log4j-core', version: '2.1'

        testImplementation group: 'junit', name: 'junit', version: '4.+'
    }
}

def scmCustomKey = System.getProperty("user.name").equals('imacadmin') ? '/Users/imacadmin/.ssh/github_id_rsa' : '/opt/bitnami/apps/jenkins/jenkins_home/.ssh/github_id_rsa'

scmVersion {
    hooks {
        pre 'fileUpdate', [file: 'gluetools-core/src/main/resources/gluecore.properties', pattern: { v, c -> /version=$v/ }, replacement: { v, c -> "version=$v" }]
        pre 'fileUpdate', [file: 'gluetoolsApp/WebContent/pages/download/page.html', pattern: { v, c -> /$v/ }, replacement: { v, c -> "$v" }]
        pre 'fileUpdate', [file: 'gluetoolsApp/WebContent/pages/userGuide/installation/page.html', pattern: { v, c -> /$v/ }, replacement: { v, c -> "$v" }]
        pre 'fileUpdate', [file: 'gluetoolsApp/WebContent/pages/userGuide/exampleProject/page.html', pattern: { v, c -> /$v/ }, replacement: { v, c -> "$v" }]
        pre 'commit', { v, p -> "Release version $v" }
    }

    scmVersion {
        versionCreator 'versionWithBranch'
        repository {
            def scmCustomKeyFile = new File(scmCustomKey)
            if (scmCustomKeyFile.exists()) {
                customKey = scmCustomKeyFile
            }
        }
        tag {
            prefix = 'gluetools'
        }
    }
}

allprojects {
    project.version = scmVersion.version
    project.group = 'cvr.ac.uk'
}

buildscript {
    repositories {
        mavenCentral()
        gradlePluginPortal() // Required for modern Gradle plugins
    }
    dependencies {
        classpath group: 'pl.allegro.tech.build', name: 'axion-release-plugin', version: '1.9.3'
        classpath group: 'com.bmuschko', name: 'gradle-docker-plugin', version: '9.3.2'
    }
}