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Require a minimum size of secondary frames in tifffile sources. #896

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merged 2 commits into from
Jul 26, 2022
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Require a minimum size of secondary frames in tifffile sources. #896

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8c116cc
Require a minimum size of secondary frames in tifffile sources.
manthey Jul 26, 2022
3e109ba
Merge branch 'master' into tifffile-min-size
manthey Jul 26, 2022
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2 changes: 1 addition & 1 deletion CHANGELOG.md
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Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@
## 1.16.0

### Features
- Add a tifffile tile source ([885](../../pull/885))
- Add a tifffile tile source ([885](../../pull/885), [896](../../pull/896))
- Added a canReadList method to large_image to show which source can be used ([895](../../pull/895))

### Improvements
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4 changes: 4 additions & 0 deletions sources/tifffile/large_image_source_tifffile/__init__.py
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Expand Up @@ -72,6 +72,7 @@ class TifffileFileTileSource(FileTileSource, metaclass=LruCacheMetaclass):

# Fallback for non-tiled or oddly tiled sources
_tileSize = 512
_minImageSize = 128
_minTileSize = 128
_maxTileSize = 2048
_maxAssociatedImageSize = 8192
Expand Down Expand Up @@ -161,6 +162,9 @@ def _findMatchingSeries(self):
skip = True
if skip:
continue
if (s.shape[s.axes.index('X')] < min(self.sizeX, self._minImageSize) and
s.shape[s.axes.index('Y')] < min(self.sizeY, self._minImageSize)):
continue
self._series.append(idx)
self._seriesShape.append({
'sizeX': s.shape[s.axes.index('X')], 'sizeY': s.shape[s.axes.index('Y')]})
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