From 865bf2dae024f03fe377c14174dc47b6534c789d Mon Sep 17 00:00:00 2001
From: GitHub Action <action@github.com>
Date: Sun, 24 Dec 2023 22:05:43 +0000
Subject: [PATCH] Updated notebooks 2023-12-24 UTC

---
 content/notebooks/89_image_array_viz.ipynb | 190 +++++++++++++++++++++
 1 file changed, 190 insertions(+)
 create mode 100644 content/notebooks/89_image_array_viz.ipynb

diff --git a/content/notebooks/89_image_array_viz.ipynb b/content/notebooks/89_image_array_viz.ipynb
new file mode 100644
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--- /dev/null
+++ b/content/notebooks/89_image_array_viz.ipynb
@@ -0,0 +1,190 @@
+{
+ "cells": [
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "[![image](https://jupyterlite.rtfd.io/en/latest/_static/badge.svg)](https://demo.leafmap.org/lab/index.html?path=notebooks/89_image_array_viz.ipynb)\n",
+    "[![image](https://studiolab.sagemaker.aws/studiolab.svg)](https://studiolab.sagemaker.aws/import/github/opengeos/leafmap/blob/master/examples/notebooks/89_image_array_viz.ipynb)\n",
+    "[![image](https://img.shields.io/badge/Open-Planetary%20Computer-black?style=flat&logo=microsoft)](https://pccompute.westeurope.cloudapp.azure.com/compute/hub/user-redirect/git-pull?repo=https://github.com/opengeos/leafmap&urlpath=lab/tree/leafmap/examples/notebooks/89_image_array_viz.ipynb&branch=master)\n",
+    "[![image](https://jupyterlite.rtfd.io/en/latest/_static/badge.svg)](https://demo.leafmap.org/lab/index.html?path=notebooks/89_image_array_viz.ipynb)\n",
+    "[![image](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/opengeos/leafmap/blob/master/examples/notebooks/89_image_array_viz.ipynb)\n",
+    "[![image](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/opengeos/leafmap/HEAD)\n",
+    "\n",
+    "**Visualizing in-memory raster datasets and image arrays**"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "# %pip install leafmap rasterio rioxarray"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "import leafmap\n",
+    "import rasterio\n",
+    "import rioxarray\n",
+    "import xarray as xr"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Download two sample raster datasets."
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "url1 = \"https://open.gishub.org/data/raster/landsat7.tif\"\n",
+    "url2 = \"https://open.gishub.org/data/raster/srtm90.tif\"\n",
+    "satellite = leafmap.download_file(url1, \"landsat7.tif\")\n",
+    "dem = leafmap.download_file(url2, \"srtm90.tif\")"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "The Landsat image contains 3 bands: nir, red, and green. Let's calculate NDVI using the nir and red bands."
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "dataset = rasterio.open(satellite)\n",
+    "nir = dataset.read(1).astype(float)\n",
+    "red = dataset.read(2).astype(float)\n",
+    "ndvi = (nir - red) / (nir + red)"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Create an in-memory raster dataset from the NDVI array and use the projection and extent of the Landsat image."
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "ndvi_image = leafmap.array_to_image(ndvi, source=satellite)"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Visualize the Landsat image and the NDVI image on the same map."
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "m = leafmap.Map()\n",
+    "m.add_raster(satellite, band=[1, 2, 3], nodata=-1, layer_name=\"Landsat 7\")\n",
+    "m.add_raster(ndvi_image, cmap=\"Greens\", layer_name=\"NDVI\")\n",
+    "m"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Use rioxarray to read raster datasets into xarray DataArrays."
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "ds = rioxarray.open_rasterio(dem)\n",
+    "ds"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Classify the DEM into 2 elevation classes."
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "array = ds.sel(band=1)\n",
+    "masked_array = xr.where(array < 2000, 0, 1)"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Create an in-memory raster dataset from the elevation class array and use the projection and extent of the DEM."
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "image = leafmap.array_to_image(masked_array, source=dem)"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Visualize the DEM and the elevation class image on the same map."
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "m = leafmap.Map()\n",
+    "m.add_raster(dem, cmap=\"terrain\", layer_name=\"DEM\")\n",
+    "m.add_raster(image, cmap=\"coolwarm\", layer_name=\"Classified DEM\")\n",
+    "m"
+   ]
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "Python (Pyodide)",
+   "language": "python",
+   "name": "python"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 5
+}