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How do I choose the size parameter #177

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Iven-gif opened this issue Aug 11, 2021 · 0 comments
Open

How do I choose the size parameter #177

Iven-gif opened this issue Aug 11, 2021 · 0 comments

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@Iven-gif
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Iven-gif commented Aug 11, 2021 •
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Hello,
I want to use jellyfish but I don't understand the size parameter (-s).
Suppose my genome size is about 1G and the Illumina short reads were 100 Gb (100× coverage), what should the size be?

Thanks,
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