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log-example.yaml
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log-example.yaml
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# example log of a single run of bot
# shows what fields are available to keep from all of the api responses
# most of these are filtered out when saving log to save space
preprint:
id: "141416"
doi: 10.1101/2021.05.09.443230
first_posted: 2021-05-10
repo: biorxiv
biorxiv_url: https://biorxiv.org/content/10.1101/2021.05.09.443230v3
url: https://api.rxivist.org/v1/papers/141416
title: Multi-color 4D superresolution light-sheet microscopy reveals organelle
interactions at isotropic 100-nm resolution and sub-second timescales
category: biophysics
abstract: Long-term visualization of the dynamic organelle-organelle or
protein-organelle interactions throughout the three-dimensional space of
whole live cells is essential to better understand their functions, but this
task remains challenging due to the limitations of existing
three-dimensional fluorescence microscopy techniques, such as an
insufficient axial resolution, low volumetric imaging rate, and
photobleaching. Here, we present the combination of a progressive
deep-learning superresolution strategy with a dual-ring-modulated SPIM
design capable of visualizing the dynamics of intracellular organelles in
live cells for hours at an isotropic spatial resolution of ~100 nm in three
dimensions and a temporal resolution up to ~17 Hz. With a compelling
spatiotemporal resolution, we substantially reveal the complex spatial
relationships and interactions between the endoplasmic reticulum (ER) and
mitochondria throughout live cells, providing new insights into ER-mediated
mitochondrial division. We also localized the motion of Drp1 oligomers in
three dimensions and observed Drp1-mediated mitochondrial branching for the
first time.
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name: Yuxuan Zhao
institution: School of Optical and Electronic Information-Wuhan National
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Technology, Wuhan, 430074, China.
orcid: null
- id: 321741
name: Meng Zhang
institution: School of Optical and Electronic Information-Wuhan National
Laboratory for Optoelectronics, Huazhong University of Science and
Technology, Wuhan, 430074, China.
orcid: http://orcid.org/0000-0002-9753-0635
- id: 470025
name: Wenting Zhang
institution: School of Optical and Electronic Information-Wuhan National
Laboratory for Optoelectronics, Huazhong University of Science and
Technology, Wuhan, 430074, China.
orcid: http://orcid.org/0000-0001-7670-5574
- id: 242783
name: Qing Liu
institution: School of Optical and Electronic Information-Wuhan National
Laboratory for Optoelectronics, Huazhong University of Science and
Technology, Wuhan, 430074, China.
orcid: http://orcid.org/0000-0001-7667-4042
- id: 273130
name: Peng Wang
institution: School of Optical and Electronic Information-Wuhan National
Laboratory for Optoelectronics, Huazhong University of Science and
Technology, Wuhan, 430074, China.
orcid: http://orcid.org/0000-0002-1541-2396
- id: 213991
name: Rong Chen
institution: Department of Chemical and Biological Engineering, Hong Kong
University of Science and Technology, Hong Kong, China
orcid: null
- id: 201966
name: Peng Fei
institution: Huazhong University of Science and Technology
orcid: http://orcid.org/0000-0003-3764-817X
- id: 462103
name: Yu-Hui Zhang
institution: School of Optical and Electronic Information-Wuhan National
Laboratory for Optoelectronics, Huazhong University of Science and
Technology, Wuhan, 430074, China.
orcid: http://orcid.org/0000-0002-5158-0645
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message: <p>The manuscript refers to numerous Supplementary Figures and
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possible to upload them as well? Thank you.</p>
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