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How can I make the width range of the curves more easily to observed? #100

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iriirica opened this issue Aug 22, 2024 · 0 comments
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@iriirica
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Thanks for providing such great tools!

I find it difficult to distinguish the curves width changes in my data. Here is my script. I installed ggsashimi using the command I install ggsashimi by conda env create -f env-r3.4.1.ymlenv-r3.4.1.yml

ggsashimi.py -b input_bams.tsv -c NC_003070.9:1365107-1368461 -g test.gtf \
    -M 10 -C 3 -O 3 --alpha 0.25 --base-size=20 --ann-height=3 --height=3 --width=20 \
    --fix-y-scale -A mean_j -P palette.txt \
    -o test -F pdf

image

I wonder if there is a parameter to adjust this, similar to the example image in the README:

image

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