Fix mac tests with conda #7145
Workflow file for this run
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| name: basic tests | |
| on: [push, pull_request] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| max-parallel: 60 | |
| matrix: | |
| os: [ubuntu-20.04] | |
| python-version: ['3.9', '3.10', '3.11', '3.12'] | |
| test-type: [unittest, search, docs] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: installing system packages | |
| run: | | |
| sudo apt-get -o Acquire::Retries=3 update | |
| sudo apt-get -o Acquire::Retries=3 install *fftw3* mpi intel-mkl* git-lfs graphviz | |
| pip install "tox<4.0.0" pip setuptools --upgrade | |
| - name: installing auxiliary data files | |
| run: | | |
| GIT_LFS_SKIP_SMUDGE=1 git clone https://git.ligo.org/lscsoft/lalsuite-extra | |
| cd lalsuite-extra | |
| git lfs pull -I "data/lalsimulation/SEOBNRv2ROM_*.dat" | |
| git lfs pull -I "data/lalsimulation/*ChirpTime*.dat" | |
| git lfs pull -I "data/lalsimulation/SEOBNRv4ROM_v2.0.hdf5" | |
| mv data/lalsimulation/* ../ | |
| cd ../ | |
| - name: run pycbc test suite | |
| run: | | |
| export LAL_DATA_PATH=$PWD | |
| tox -e py-${{matrix.test-type}} | |
| - name: check help messages work | |
| if: matrix.test-type == 'unittest' | |
| run: | | |
| export LAL_DATA_PATH=$PWD | |
| tox -e py-help | |
| - name: run inference tests | |
| if: matrix.test-type == 'search' | |
| run: | | |
| export LAL_DATA_PATH=$PWD | |
| tox -e py-inference | |
| - name: store documentation page | |
| if: matrix.test-type == 'docs' && matrix.python-version == '3.12' | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: documentation-page | |
| path: _gh-pages | |
| deploy_documentation: | |
| runs-on: ubuntu-latest | |
| needs: build | |
| if: github.ref == 'refs/heads/master' && github.event_name == 'push' | |
| steps: | |
| - name: retrieve built documentation | |
| uses: actions/download-artifact@v4.1.7 | |
| with: | |
| name: documentation-page | |
| - name: debug | |
| run: | | |
| mkdir _gh-pages | |
| mv latest _gh-pages | |
| - name: deploying to gh-pages | |
| uses: JamesIves/github-pages-deploy-action@3.7.1 | |
| with: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| BRANCH: gh-pages | |
| FOLDER: _gh-pages | |
| SINGLE_COMMIT: true |