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fix workflow and add more
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hasindu2008 committed Nov 16, 2023
1 parent 5784fec commit dbc4e3e
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11 changes: 11 additions & 0 deletions .github/workflows/c-cpp.yml
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Expand Up @@ -107,6 +107,17 @@ jobs:
run: make clean && make CC=icc -j8 zstd=1
- name: test zstd
run: make test zstd=1 CC=icc
ubuntu_22:
name: Ubuntu 22
runs-on: ubuntu-22.04
steps:
- uses: actions/checkout@v2
- name: install packages
run: sudo apt-get update && sudo apt-get install zlib1g-dev
- name: build-gcc
run: make -j8
- name: test-gcc
run: make test
os_x_11:
name: OSX 11
runs-on: macos-11
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4 changes: 2 additions & 2 deletions .github/workflows/python.yml
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Expand Up @@ -82,7 +82,7 @@ jobs:
steps:
- uses: actions/checkout@v2
- name: install packages
run: pip3 install numpy
run: pip3 install numpy setuptools
- name: build
run: make pyslow5
- name: test
Expand All @@ -93,7 +93,7 @@ jobs:
steps:
- uses: actions/checkout@v2
- name: install packages
run: pip3 install numpy
run: pip3 install numpy setuptools
- name: build
run: make pyslow5
- name: test
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3 changes: 3 additions & 0 deletions docs/slow5_api/slow5.md
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Expand Up @@ -141,6 +141,9 @@ High-level API consists of following functions:

Low-level API allows much more efficient access to BLOW5 files compared to the high-level API. Low-level API is documented [here](slow5_low_level_api.md).

### Extra multi-threaded API

An optional built-in multithreaded API is under construction. See the [examples](https://github.com/hasindu2008/slow5lib/tree/master/examples/mt) for now. If you intend to use it, request through an [issue](https://github.com/hasindu2008/slow5lib/issues), so that we can finalise and document it.

## CITATION

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