template for rna004

hasindu2008 · Jan 20, 2024 · 3db7447 · 3db7447
1 parent 198ad51
commit 3db7447
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Showing 4 changed files with 262,209 additions and 14 deletions.
diff --git a/src/model.c b/src/model.c
@@ -169,8 +169,12 @@ uint32_t set_model(model_t* model, uint32_t model_id) {
         num_kmer=262144;
         inbuilt_model=r10_4_nucleotide_9mer_template_model_builtin_data;
         assert(num_kmer == (uint32_t)(1 << 2*kmer_size)); //num_kmer should be 4^kmer_size
-    }
-    else{
+    } else if(model_id==MODEL_ID_RNA_RNA004_NUCLEOTIDE){
+        kmer_size=9;
+        num_kmer=262144;
+        inbuilt_model=rna004_70bps_u_to_t_rna_9mer_template_model_builtin_data;
+        assert(num_kmer == (uint32_t)(1 << 2*kmer_size)); //num_kmer should be 4^kmer_size
+    } else{
         assert(0);
     }