From 5bc3727b213d6b50f3fa35416a59956cbc6bb8a3 Mon Sep 17 00:00:00 2001 From: Hasindu Gamaarachchi Date: Sat, 30 Sep 2023 12:36:29 +1000 Subject: [PATCH] bump version to 0.2.1 --- README.md | 2 +- src/sq.h | 2 +- test/dna_r10_paf-ref.sam.exp | 2 +- test/rna_paf.sam.exp | 2 +- test/vupdate.sh | 0 5 files changed, 4 insertions(+), 4 deletions(-) mode change 100644 => 100755 test/vupdate.sh diff --git a/README.md b/README.md index ea3f371..a332eab 100755 --- a/README.md +++ b/README.md @@ -23,7 +23,7 @@ After getting the basic *ssssim* implemented in ~8 hours and successfully baseca For x86-64 Linux, you can use the precompiled binaries under [releases](https://github.com/hasindu2008/squigulator/releases): ``` -VERSION=0.2.0 +VERSION=0.2.1 wget https://github.com/hasindu2008/squigulator/releases/download/v${VERSION}/squigulator-v${VERSION}-x86_64-linux-binaries.tar.gz tar xf squigulator-v${VERSION}-x86_64-linux-binaries.tar.gz && cd squigulator-v${VERSION} ./squigulator --help diff --git a/src/sq.h b/src/sq.h index f28a14e..8b2eb8f 100644 --- a/src/sq.h +++ b/src/sq.h @@ -8,7 +8,7 @@ #include #include "slow5/slow5.h" -#define SQ_VERSION "0.2.0-dirty" +#define SQ_VERSION "0.2.1" //model types #define MODEL_TYPE_NUCLEOTIDE 1 diff --git a/test/dna_r10_paf-ref.sam.exp b/test/dna_r10_paf-ref.sam.exp index 3bcf5a3..404e012 100644 --- a/test/dna_r10_paf-ref.sam.exp +++ b/test/dna_r10_paf-ref.sam.exp @@ -1,4 +1,4 @@ @SQ SN:MN908947.3 LN:29903 -@PG ID:squigulator PN:squigulator VN:0.2.0-dirty +@PG ID:squigulator PN:squigulator VN:0.2.1 S1_1!MN908947.3!0!5360!- 16 MN908947.3 1 255 5360M * 0 0 ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCGAACTGCACCTCATGGTCATGTTATGGTTGAGCTGGTAGCAGAACTCGAAGGCATTCAGTACGGTCGTAGTGGTGAGACACTTGGTGTCCTTGTCCCTCATGTGGGCGAAATACCAGTGGCTTACCGCAAGGTTCTTCTTCGTAAGAACGGTAATAAAGGAGCTGGTGGCCATAGTTACGGCGCCGATCTAAAGTCATTTGACTTAGGCGACGAGCTTGGCACTGATCCTTATGAAGATTTTCAAGAAAACTGGAACACTAAACATAGCAGTGGTGTTACCCGTGAACTCATGCGTGAGCTTAACGGAGGGGCATACACTCGCTATGTCGATAACAACTTCTGTGGCCCTGATGGCTACCCTCTTGAGTGCATTAAAGACCTTCTAGCACGTGCTGGTAAAGCTTCATGCACTTTGTCCGAACAACTGGACTTTATTGACACTAAGAGGGGTGTATACTGCTGCCGTGAACATGAGCATGAAATTGCTTGGTACACGGAACGTTCTGAAAAGAGCTATGAATTGCAGACACCTTTTGAAATTAAATTGGCAAAGAAATTTGACACCTTCAATGGGGAATGTCCAAATTTTGTATTTCCCTTAAATTCCATAATCAAGACTATTCAACCAAGGGTTGAAAAGAAAAAGCTTGATGGCTTTATGGGTAGAATTCGATCTGTCTATCCAGTTGCGTCACCAAATGAATGCAACCAAATGTGCCTTTCAACTCTCATGAAGTGTGATCATTGTGGTGAAACTTCATGGCAGACGGGCGATTTTGTTAAAGCCACTTGCGAATTTTGTGGCACTGAGAATTTGACTAAAGAAGGTGCCACTACTTGTGGTTACTTACCCCAAAATGCTGTTGTTAAAATTTATTGTCCAGCATGTCACAATTCAGAAGTAGGACCTGAGCATAGTCTTGCCGAATACCATAATGAATCTGGCTTGAAAACCATTCTTCGTAAGGGTGGTCGCACTATTGCCTTTGGAGGCTGTGTGTTCTCTTATGTTGGTTGCCATAACAAGTGTGCCTATTGGGTTCCACGTGCTAGCGCTAACATAGGTTGTAACCATACAGGTGTTGTTGGAGAAGGTTCCGAAGGTCTTAATGACAACCTTCTTGAAATACTCCAAAAAGAGAAAGTCAACATCAATATTGTTGGTGACTTTAAACTTAATGAAGAGATCGCCATTATTTTGGCATCTTTTTCTGCTTCCACAAGTGCTTTTGTGGAAACTGTGAAAGGTTTGGATTATAAAGCATTCAAACAAATTGTTGAATCCTGTGGTAATTTTAAAGTTACAAAAGGAAAAGCTAAAAAAGGTGCCTGGAATATTGGTGAACAGAAATCAATACTGAGTCCTCTTTATGCATTTGCATCAGAGGCTGCTCGTGTTGTACGATCAATTTTCTCCCGCACTCTTGAAACTGCTCAAAATTCTGTGCGTGTTTTACAGAAGGCCGCTATAACAATACTAGATGGAATTTCACAGTATTCACTGAGACTCATTGATGCTATGATGTTCACATCTGATTTGGCTACTAACAATCTAGTTGTAATGGCCTACATTACAGGTGGTGTTGTTCAGTTGACTTCGCAGTGGCTAACTAACATCTTTGGCACTGTTTATGAAAAACTCAAACCCGTCCTTGATTGGCTTGAAGAGAAGTTTAAGGAAGGTGTAGAGTTTCTTAGAGACGGTTGGGAAATTGTTAAATTTATCTCAACCTGTGCTTGTGAAATTGTCGGTGGACAAATTGTCACCTGTGCAAAGGAAATTAAGGAGAGTGTTCAGACATTCTTTAAGCTTGTAAATAAATTTTTGGCTTTGTGTGCTGACTCTATCATTATTGGTGGAGCTAAACTTAAAGCCTTGAATTTAGGTGAAACATTTGTCACGCACTCAAAGGGATTGTACAGAAAGTGTGTTAAATCCAGAGAAGAAACTGGCCTACTCATGCCTCTAAAAGCCCCAAAAGAAATTATCTTCTTAGAGGGAGAAACACTTCCCACAGAAGTGTTAACAGAGGAAGTTGTCTTGAAAACTGGTGATTTACAACCATTAGAACAACCTACTAGTGAAGCTGTTGAAGCTCCATTGGTTGGTACACCAGTTTGTATTAACGGGCTTATGTTGCTCGAAATCAAAGACACAGAAAAGTACTGTGCCCTTGCACCTAATATGATGGTAACAAACAATACCTTCACACTCAAAGGCGGTGCACCAACAAAGGTTACTTTTGGTGATGACACTGTGATAGAAGTGCAAGGTTACAAGAGTGTGAATATCACTTTTGAACTTGATGAAAGGATTGATAAAGTACTTAATGAGAAGTGCTCTGCCTATACAGTTGAACTCGGTACAGAAGTAAATGAGTTCGCCTGTGTTGTGGCAGATGCTGTCATAAAAACTTTGCAACCAGTATCTGAATTACTTACACCACTGGGCATTGATTTAGATGAGTGGAGTATGGCTACATACTACTTATTTGATGAGTCTGGTGAGTTTAAATTGGCTTCACATATGTATTGTTCTTTCTACCCTCCAGATGAGGATGAAGAAGAAGGTGATTGTGAAGAAGAAGAGTTTGAGCCATCAACTCAATATGAGTATGGTACTGAAGATGATTACCAAGGTAAACCTTTGGAATTTGGTGCCACTTCTGCTGCTCTTCAACCTGAAGAAGAGCAAGAAGAAGATTGGTTAGATGATGATAGTCAACAAACTGTTGGTCAACAAGACGGCAGTGAGGACAATCAGACAACTACTATTCAAACAATTGTTGAGGTTCAACCTCAATTAGAGATGGAACTTACACCAGTTGTTCAGACTATTGAAGTGAATAGTTTTAGTGGTTATTTAAAACTTACTGACAATGTATACATTAAAAATGCAGACATTGTGGAAGAAGCTAAAAAGGTAAAACCAACAGTGGTTGTTAATGCAGCCAATGTTTACCTTAAACATGGAGGAGGTGTTGCAGGAGCCTTAAATAAGGCTACTAACAATGCCATGCAAGTTGAATCTGATGATTACATAGCTACTAATGGACCACTTAAAGTGGGTGGTAGTTGTGTTTTAAGCGGACACAATCTTGCTAAACACTGTCTTCATGTTGTCGGCCCAAATGTTAACAAAGGTGAAGACATTCAACTTCTTAAGAGTGCTTATGAAAATTTTAATCAGCACGAAGTTCTACTTGCACCATTATTATCAGCTGGTATTTTTGGTGCTGACCCTATACATTCTTTAAGAGTTTGTGTAGATACTGTTCGCACAAATGTCTACTTAGCTGTCTTTGATAAAAATCTCTATGACAAACTTGTTTCAAGCTTTTTGGAAATGAAGAGTGAAAAGCAAGTTGAACAAAAGATCGCTGAGATTCCTAAAGAGGAAGTTAAGCCATTTATAACTGAAAGTAAACCTTCAGTTGAACAGAGAAAACAAGATGATAAGAAAATCAAAGCTTGTGTTGAAGAAGTTACAACAACTCTGGAAGAAACTAAGTTCCTCACAGAAAACTTGTTACTTTATATTGACATTAATGGCAATCTTCATCCAGATTCTGCCACTCTTGTTAGTGACATTGACATCACTTTCTTAAAGAAAGATGCTCCATATATAGTGGGTGATGTTGTTCAAGAGGGTGTTTTAACTGCTGTGGTTATACCTACTAAAAAGGCTGGTGGCACTACTGAAATGCTAGCGAAAGCTTTGAGAAAAGTGCCAACAGACAATTATATAACCACTTACCCGGGTCAGGGTTTAAATGGTTACACTGTAGAGGAGGCAAAGACAGTGCTTAAAAAGTGTAAAAGTGCCTTTTACATTCTACCATCTATTATCTCTAATGAGAAGCAAGAAATTCTTGGAACTGTTTCTTGGAATTTGCGAGAAATGCTTGCACATGCAGAAGAAACACGCAAATTAATGCCTGTCTGTGTGGAAACTAAAGCCATAGTTTCAACTATACAGCGTAAATATAAGGGTATTAAAATACAAGAGGGTGTGGTTGATTATGGTGCTAGATTTTACTTTTACACCAGTAAAACAACTGTAGCGTCACTTATCAACACACTTAACGATCTAAATGAAACTCTTGTTACAATGCCACTTGGCTATGTAACACATGGCTTAAATTTGGAAGAAGCTGCTCGGTATATGAGATCTCTCAAAGTGCCAGCTACAGTTTCTGTTTCTTCACCTGATGCTGTTACAGCGTATAATGGTTATCTTACTTCTTCTTCTAAAACACCTGAAGAACATTTTATTGAAACCATCTCACTTGCTGGTTCCTATAAAGATTGGTCCTATTCTGGACAATCTACACAACTAGGTATAGAATTTCTTAAGAGAGGTGATAAAAGTGTATATTACACTAGTAATCCTACCACATTCCACCTAGATGGTGAAGTTATCACCTTTGACAATCTTAAGACACTTCTTTCTTTGAGAGAAGTGAGGACTATTAAGGTGTTTACAACAGTAGACAACATTAACCTCCACACGCAAGTTGTGGACATGTCAATGACATATGGACAACAGTTTGGTCCAACTTATTTGGATGGAGCTGATGTTACTAAAATAAAACCTCATAATTCACATGAAGGTAAAACATTTTATGTTTTACCTAATGATGACACTCTACGTGTTGAGGCTTTTGAGTACTACCACACAACTGATCCTAGTTTTCTGGGTAGGTACATGTCAGCATTAAATCACACTAAAAAGTGGAAATACCCACAAGTTAATGGTTTAACTTCTATTAAATGGGCAGATAACAACTGTTATCTTGCCACTGCATTGTTAACACTCCAACAAATAGAGTTGAAGTTTAATCCACCTGCTCTACAAGATGCTT * si:Z:0,53775,0,5352 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S1_2!MN908947.3!7867!17128!- 16 MN908947.3 7868 255 9261M * 0 0 TCATTGCCTATTAATGTTATAGTTTTTGATGGTAAATCAAAATGTGAAGAATCATCTGCAAAATCAGCGTCTGTTTACTACAGTCAGCTTATGTGTCAACCTATACTGTTACTAGATCAGGCATTAGTGTCTGATGTTGGTGATAGTGCGGAAGTTGCAGTTAAAATGTTTGATGCTTACGTTAATACGTTTTCATCAACTTTTAACGTACCAATGGAAAAACTCAAAACACTAGTTGCAACTGCAGAAGCTGAACTTGCAAAGAATGTGTCCTTAGACAATGTCTTATCTACTTTTATTTCAGCAGCTCGGCAAGGGTTTGTTGATTCAGATGTAGAAACTAAAGATGTTGTTGAATGTCTTAAATTGTCACATCAATCTGACATAGAAGTTACTGGCGATAGTTGTAATAACTATATGCTCACCTATAACAAAGTTGAAAACATGACACCCCGTGACCTTGGTGCTTGTATTGACTGTAGTGCGCGTCATATTAATGCGCAGGTAGCAAAAAGTCACAACATTGCTTTGATATGGAACGTTAAAGATTTCATGTCATTGTCTGAACAACTACGAAAACAAATACGTAGTGCTGCTAAAAAGAATAACTTACCTTTTAAGTTGACATGTGCAACTACTAGACAAGTTGTTAATGTTGTAACAACAAAGATAGCACTTAAGGGTGGTAAAATTGTTAATAATTGGTTGAAGCAGTTAATTAAAGTTACACTTGTGTTCCTTTTTGTTGCTGCTATTTTCTATTTAATAACACCTGTTCATGTCATGTCTAAACATACTGACTTTTCAAGTGAAATCATAGGATACAAGGCTATTGATGGTGGTGTCACTCGTGACATAGCATCTACAGATACTTGTTTTGCTAACAAACATGCTGATTTTGACACATGGTTTAGCCAGCGTGGTGGTAGTTATACTAATGACAAAGCTTGCCCATTGATTGCTGCAGTCATAACAAGAGAAGTGGGTTTTGTCGTGCCTGGTTTGCCTGGCACGATATTACGCACAACTAATGGTGACTTTTTGCATTTCTTACCTAGAGTTTTTAGTGCAGTTGGTAACATCTGTTACACACCATCAAAACTTATAGAGTACACTGACTTTGCAACATCAGCTTGTGTTTTGGCTGCTGAATGTACAATTTTTAAAGATGCTTCTGGTAAGCCAGTACCATATTGTTATGATACCAATGTACTAGAAGGTTCTGTTGCTTATGAAAGTTTACGCCCTGACACACGTTATGTGCTCATGGATGGCTCTATTATTCAATTTCCTAACACCTACCTTGAAGGTTCTGTTAGAGTGGTAACAACTTTTGATTCTGAGTACTGTAGGCACGGCACTTGTGAAAGATCAGAAGCTGGTGTTTGTGTATCTACTAGTGGTAGATGGGTACTTAACAATGATTATTACAGATCTTTACCAGGAGTTTTCTGTGGTGTAGATGCTGTAAATTTACTTACTAATATGTTTACACCACTAATTCAACCTATTGGTGCTTTGGACATATCAGCATCTATAGTAGCTGGTGGTATTGTAGCTATCGTAGTAACATGCCTTGCCTACTATTTTATGAGGTTTAGAAGAGCTTTTGGTGAATACAGTCATGTAGTTGCCTTTAATACTTTACTATTCCTTATGTCATTCACTGTACTCTGTTTAACACCAGTTTACTCATTCTTACCTGGTGTTTATTCTGTTATTTACTTGTACTTGACATTTTATCTTACTAATGATGTTTCTTTTTTAGCACATATTCAGTGGATGGTTATGTTCACACCTTTAGTACCTTTCTGGATAACAATTGCTTATATCATTTGTATTTCCACAAAGCATTTCTATTGGTTCTTTAGTAATTACCTAAAGAGACGTGTAGTCTTTAATGGTGTTTCCTTTAGTACTTTTGAAGAAGCTGCGCTGTGCACCTTTTTGTTAAATAAAGAAATGTATCTAAAGTTGCGTAGTGATGTGCTATTACCTCTTACGCAATATAATAGATACTTAGCTCTTTATAATAAGTACAAGTATTTTAGTGGAGCAATGGATACAACTAGCTACAGAGAAGCTGCTTGTTGTCATCTCGCAAAGGCTCTCAATGACTTCAGTAACTCAGGTTCTGATGTTCTTTACCAACCACCACAAACCTCTATCACCTCAGCTGTTTTGCAGAGTGGTTTTAGAAAAATGGCATTCCCATCTGGTAAAGTTGAGGGTTGTATGGTACAAGTAACTTGTGGTACAACTACACTTAACGGTCTTTGGCTTGATGACGTAGTTTACTGTCCAAGACATGTGATCTGCACCTCTGAAGACATGCTTAACCCTAATTATGAAGATTTACTCATTCGTAAGTCTAATCATAATTTCTTGGTACAGGCTGGTAATGTTCAACTCAGGGTTATTGGACATTCTATGCAAAATTGTGTACTTAAGCTTAAGGTTGATACAGCCAATCCTAAGACACCTAAGTATAAGTTTGTTCGCATTCAACCAGGACAGACTTTTTCAGTGTTAGCTTGTTACAATGGTTCACCATCTGGTGTTTACCAATGTGCTATGAGGCCCAATTTCACTATTAAGGGTTCATTCCTTAATGGTTCATGTGGTAGTGTTGGTTTTAACATAGATTATGACTGTGTCTCTTTTTGTTACATGCACCATATGGAATTACCAACTGGAGTTCATGCTGGCACAGACTTAGAAGGTAACTTTTATGGACCTTTTGTTGACAGGCAAACAGCACAAGCAGCTGGTACGGACACAACTATTACAGTTAATGTTTTAGCTTGGTTGTACGCTGCTGTTATAAATGGAGACAGGTGGTTTCTCAATCGATTTACCACAACTCTTAATGACTTTAACCTTGTGGCTATGAAGTACAATTATGAACCTCTAACACAAGACCATGTTGACATACTAGGACCTCTTTCTGCTCAAACTGGAATTGCCGTTTTAGATATGTGTGCTTCATTAAAAGAATTACTGCAAAATGGTATGAATGGACGTACCATATTGGGTAGTGCTTTATTAGAAGATGAATTTACACCTTTTGATGTTGTTAGACAATGCTCAGGTGTTACTTTCCAAAGTGCAGTGAAAAGAACAATCAAGGGTACACACCACTGGTTGTTACTCACAATTTTGACTTCACTTTTAGTTTTAGTCCAGAGTACTCAATGGTCTTTGTTCTTTTTTTTGTATGAAAATGCCTTTTTACCTTTTGCTATGGGTATTATTGCTATGTCTGCTTTTGCAATGATGTTTGTCAAACATAAGCATGCATTTCTCTGTTTGTTTTTGTTACCTTCTCTTGCCACTGTAGCTTATTTTAATATGGTCTATATGCCTGCTAGTTGGGTGATGCGTATTATGACATGGTTGGATATGGTTGATACTAGTTTGTCTGGTTTTAAGCTAAAAGACTGTGTTATGTATGCATCAGCTGTAGTGTTACTAATCCTTATGACAGCAAGAACTGTGTATGATGATGGTGCTAGGAGAGTGTGGACACTTATGAATGTCTTGACACTCGTTTATAAAGTTTATTATGGTAATGCTTTAGATCAAGCCATTTCCATGTGGGCTCTTATAATCTCTGTTACTTCTAACTACTCAGGTGTAGTTACAACTGTCATGTTTTTGGCCAGAGGTATTGTTTTTATGTGTGTTGAGTATTGCCCTATTTTCTTCATAACTGGTAATACACTTCAGTGTATAATGCTAGTTTATTGTTTCTTAGGCTATTTTTGTACTTGTTACTTTGGCCTCTTTTGTTTACTCAACCGCTACTTTAGACTGACTCTTGGTGTTTATGATTACTTAGTTTCTACACAGGAGTTTAGATATATGAATTCACAGGGACTACTCCCACCCAAGAATAGCATAGATGCCTTCAAACTCAACATTAAATTGTTGGGTGTTGGTGGCAAACCTTGTATCAAAGTAGCCACTGTACAGTCTAAAATGTCAGATGTAAAGTGCACATCAGTAGTCTTACTCTCAGTTTTGCAACAACTCAGAGTAGAATCATCATCTAAATTGTGGGCTCAATGTGTCCAGTTACACAATGACATTCTCTTAGCTAAAGATACTACTGAAGCCTTTGAAAAAATGGTTTCACTACTTTCTGTTTTGCTTTCCATGCAGGGTGCTGTAGACATAAACAAGCTTTGTGAAGAAATGCTGGACAACAGGGCAACCTTACAAGCTATAGCCTCAGAGTTTAGTTCCCTTCCATCATATGCAGCTTTTGCTACTGCTCAAGAAGCTTATGAGCAGGCTGTTGCTAATGGTGATTCTGAAGTTGTTCTTAAAAAGTTGAAGAAGTCTTTGAATGTGGCTAAATCTGAATTTGACCGTGATGCAGCCATGCAACGTAAGTTGGAAAAGATGGCTGATCAAGCTATGACCCAAATGTATAAACAGGCTAGATCTGAGGACAAGAGGGCAAAAGTTACTAGTGCTATGCAGACAATGCTTTTCACTATGCTTAGAAAGTTGGATAATGATGCACTCAACAACATTATCAACAATGCAAGAGATGGTTGTGTTCCCTTGAACATAATACCTCTTACAACAGCAGCCAAACTAATGGTTGTCATACCAGACTATAACACATATAAAAATACGTGTGATGGTACAACATTTACTTATGCATCAGCATTGTGGGAAATCCAACAGGTTGTAGATGCAGATAGTAAAATTGTTCAACTTAGTGAAATTAGTATGGACAATTCACCTAATTTAGCATGGCCTCTTATTGTAACAGCTTTAAGGGCCAATTCTGCTGTCAAATTACAGAATAATGAGCTTAGTCCTGTTGCACTACGACAGATGTCTTGTGCTGCCGGTACTACACAAACTGCTTGCACTGATGACAATGCGTTAGCTTACTACAACACAACAAAGGGAGGTAGGTTTGTACTTGCACTGTTATCCGATTTACAGGATTTGAAATGGGCTAGATTCCCTAAGAGTGATGGAACTGGTACTATCTATACAGAACTGGAACCACCTTGTAGGTTTGTTACAGACACACCTAAAGGTCCTAAAGTGAAGTATTTATACTTTATTAAAGGATTAAACAACCTAAATAGAGGTATGGTACTTGGTAGTTTAGCTGCCACAGTACGTCTACAAGCTGGTAATGCAACAGAAGTGCCTGCCAATTCAACTGTATTATCTTTCTGTGCTTTTGCTGTAGATGCTGCTAAAGCTTACAAAGATTATCTAGCTAGTGGGGGACAACCAATCACTAATTGTGTTAAGATGTTGTGTACACACACTGGTACTGGTCAGGCAATAACAGTTACACCGGAAGCCAATATGGATCAAGAATCCTTTGGTGGTGCATCGTGTTGTCTGTACTGCCGTTGCCACATAGATCATCCAAATCCTAAAGGATTTTGTGACTTAAAAGGTAAGTATGTACAAATACCTACAACTTGTGCTAATGACCCTGTGGGTTTTACACTTAAAAACACAGTCTGTACCGTCTGCGGTATGTGGAAAGGTTATGGCTGTAGTTGTGATCAACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCACTAGTACTGATGTCGTATACAGGGCTTTTGACATCTACAATGATAAAGTAGCTGGTTTTGCTAAATTCCTAAAAACTAATTGTTGTCGCTTCCAAGAAAAGGACGAAGATGACAATTTAATTGATTCTTACTTTGTAGTTAAGAGACACACTTTCTCTAACTACCAACATGAAGAAACAATTTATAATTTACTTAAGGATTGTCCAGCTGTTGCTAAACATGACTTCTTTAAGTTTAGAATAGACGGTGACATGGTACCACATATATCACGTCAACGTCTTACTAAATACACAATGGCAGACCTCGTCTATGCTTTAAGGCATTTTGATGAAGGTAATTGTGACACATTAAAAGAAATACTTGTCACATACAATTGTTGTGATGATGATTATTTCAATAAAAAGGACTGGTATGATTTTGTAGAAAACCCAGATATATTACGCGTATACGCCAACTTAGGTGAACGTGTACGCCAAGCTTTGTTAAAAACAGTACAATTCTGTGATGCCATGCGAAATGCTGGTATTGTTGGTGTACTGACATTAGATAATCAAGATCTCAATGGTAACTGGTATGATTTCGGTGATTTCATACAAACCACGCCAGGTAGTGGAGTTCCTGTTGTAGATTCTTATTATTCATTGTTAATGCCTATATTAACCTTGACCAGGGCTTTAACTGCAGAGTCACATGTTGACACTGACTTAACAAAGCCTTACATTAAGTGGGATTTGTTAAAATATGACTTCACGGAAGAGAGGTTAAAACTCTTTGACCGTTATTTTAAATATTGGGATCAGACATACCACCCAAATTGTGTTAACTGTTTGGATGACAGATGCATTCTGCATTGTGCAAACTTTAATGTTTTATTCTCTACAGTGTTCCCACCTACAAGTTTTGGACCACTAGTGAGAAAAATATTTGTTGATGGTGTTCCATTTGTAGTTTCAACTGGATACCACTTCAGAGAGCTAGGTGTTGTACATAATCAGGATGTAAACTTACATAGCTCTAGACTTAGTTTTAAGGAATTACTTGTGTATGCTGCTGACCCTGCTATGCACGCTGCTTCTGGTAATCTATTACTAGATAAACGCACTACGTGCTTTTCAGTAGCTGCACTTACTAACAATGTTGCTTTTCAAACTGTCAAACCCGGTAATTTTAACAAAGACTTCTATGACTTTGCTGTGTCTAAGGGTTTCTTTAAGGAAGGAAGTTCTGTTGAATTAAAACACTTCTTCTTTGCTCAGGATGGTAATGCTGCTATCAGCGATTATGACTACTATCGTTATAATCTACCAACAATGTGTGATATCAGACAACTACTATTTGTAGTTGAAGTTGTTGATAAGTACTTTGATTGTTACGATGGTGGCTGTATTAATGCTAACCAAGTCATCGTCAACAACCTAGACAAATCAGCTGGTTTTCCATTTAATAAATGGGGTAAGGCTAGACTTTATTATGATTCAATGAGTTATGAGGATCAAGATGCACTTTTCGCATATACAAAACGTAATGTCATCCCTACTATAACTCAAATGAATCTTAAGTATGCCATTAGTGCAAAGAATAGAGCTCGCACCGTAGCTGGTGTCTCTATCTGTAGTACTATGACCAATAGACAGTTTCATCAAAAATTATTGAAATCAATAGCCGCCACTAGAGGAGCTACTGTAGTAATTGGAACAAGCAAATTCTATGGTGGTTGGCACAACATGTTAAAAACTGTTTATAGTGATGTAGAAAACCCTCACCTTATGGGTTGGGATTATCCTAAATGTGATAGAGCCATGCCTAACATGCTTAGAATTATGGCCTCACTTGTTCTTGCTCGCAAACATACAACGTGTTGTAGCTTGTCACACCGTTTCTATAGATTAGCTAATGAGTGTGCTCAAGTATTGAGTGAAATGGTCATGTGTGGCGGTTCACTATATGTTAAACCAGGTGGAACCTCATCAGGAGATGCCACAACTGCTTATGCTAATAGTGTTTTTAACATTTGTCAAGCTGTCACGGCCAATGTTAATGCACTTTTATCTACTGATGGTAACAAAATTGCCGATAAGTATGTCCGCAATTTACAACACAGACTTTATGAGTGTCTCTATAGAAATAGAGATGTTGACACAGACTTTGTGAATGAGTTTTACGCATATTTGCGTAAACATTTCTCAATGATGATACTCTCTGACGATGCTGTTGTGTGTTTCAATAGCACTTATGCATCTCAAGGTCTAGTGGCTAGCATAAAGAACTTTAAGTCAGTTCTTTATTATCAAAACAATGTTTTTATGTCTGAAGCAAAATGTTGGACTGAGACTGACCTTACTAAAGGACCTCATGAATTTTGCTCTCAACATACAATGCTAGTTAAACAGGGTGATGATTATGTGTACCTTCCTTACCCAGATCCATCAAGAATCCTAGGGGCCGGCTGTTTTGTAGATGATATCGTAAAAACAGATGGTACACTTATGATTGAACGGTTCGTGTCTTTAGCTATAGATGCTTACCCACTTACTAAACATCCTAATCAGGAGTATGCTGATGTCTTTCATTTGTACTTACAATACATAAGAAAGCTACATGATGAGTTAACAGGACACATGTTAGACATGTATTCTGTTATGCTTACTAATGATAACACTTCAAGGTATTGGGAACCTGAGTTTTATGAGGCTATGTACACACCGCATACAGTCTTACAGGCTGTTGGGGCTTGTGTTCTTTGCAATTCACAGACTTCATTAAGATGTGGTGCTTGCATACGTAGACCATTCTTATGTTGTAAATGCTGTTACGACCATGTCATATCAACATCACATAAATTAGTCTTGTCTGTTAATCCGTATGTTTGCAATGCTCCAGGTTGTGATGTCACAGATGTGACTCAACTTTACTTAGGAGGTATGAGCTATTATTGTAAATCACATAAACCACCCATTAGTTTTCCATTGTGTGCTAATGGACAAGTTTTTGGTTTATATAAAAATACATGTGTTGGTAGCGATAATGTTACTGACTTTAATGCAATTGCAACATGTGACTGGACAAATGCTGGTGATTACATTTTAGCTAACACCTGTACTGAAAGACTCAAGCTTTTTGCAGCAGAAACGCTCAAAGCTACTGAGGAGACATTTAAACTGTCTTATGGTATTGCTACTGTACGTGAAGTGCTGTCTGACAGAGAATTACATCTTTCATGGGAAGTTGGTAAACCTAGACCACCACTTAACCGAAATTATGTCTTTACTGGTTATCGTGTAACTAAAAACAGTAAAGTACAAATAGGAGAGTACACCTTTGAAAAAGGTGACTATGGTGATGCTGTTGTTTACCGAGGTACAACAACTTACAAATTAAATGTTGGTGATTATTTTGTGCTGACATCACATACAGTAATGCCATTAAGTGCACCTACACTAGTGCCACAAGAGCACTATGTTAGAATTACTGGCTTATACCCAACACTCAATATCTCAGATGAGTTTTCTAGCAATGTTGCAAATTATCAAAAGGTTGGTATGCAAAAGTATTCTACACTCCAGGGACCACCTGGTACTGGTAAGAGTCATTTTGCTATTGGCCTAGCTCTCT * si:Z:0,92814,7867,17120 ss:Z:15,6,18,12,7,13,7,12,3,17,6,10,6,9,6,15,5,6,11,8,9,6,11,19,5,8,6,13,3,11,15,11,10,14,18,3,10,6,5,10,16,12,14,6,5,10,21,10,11,12,7,4,5,5,17,7,8,6,17,10,1,17,10,7,5,8,11,10,4,10,14,8,14,9,15,14,8,12,15,11,6,11,12,2,9,6,15,3,10,5,7,10,14,10,5,9,7,4,4,10,9,10,9,10,8,10,8,7,14,3,16,15,9,15,5,17,7,9,10,7,12,11,7,9,12,10,10,9,8,9,13,11,9,6,4,10,6,4,14,16,10,3,15,11,9,8,14,5,3,4,12,11,7,6,15,1,19,14,1,4,12,13,5,11,12,12,9,12,15,4,6,5,9,16,12,12,9,12,17,17,10,16,15,18,6,11,12,8,12,10,4,6,12,6,9,15,6,7,7,11,9,4,3,10,6,10,11,7,12,13,19,7,2,16,1,13,9,12,15,9,8,14,8,15,5,12,9,9,15,1,13,9,11,13,11,6,12,9,8,11,14,13,13,14,15,9,13,11,4,7,11,14,9,6,14,11,16,11,7,11,7,12,7,11,13,15,16,11,5,8,11,11,16,9,10,11,4,9,14,7,14,20,10,9,7,12,7,4,6,6,17,8,6,13,12,7,9,6,9,7,5,18,13,5,8,10,12,16,3,8,10,15,6,6,9,13,13,16,13,10,7,8,12,9,11,9,8,11,10,9,21,9,18,16,9,9,12,7,8,11,20,5,17,12,9,8,1,13,2,6,14,13,1,10,7,9,7,8,6,9,10,11,8,11,11,6,3,7,13,9,7,10,10,1,16,10,10,5,13,11,16,15,10,13,8,9,14,9,13,10,9,5,11,9,9,11,10,12,19,20,7,9,8,13,12,6,12,6,3,7,8,8,17,12,13,12,13,10,13,18,10,3,8,8,13,12,15,7,15,9,9,14,8,9,6,12,12,8,12,9,1,4,13,8,6,16,8,11,3,14,17,10,9,6,8,13,15,7,6,7,1,8,4,7,16,9,6,11,11,13,9,13,7,6,12,12,14,8,17,10,2,8,7,13,7,14,10,12,3,16,13,10,3,9,9,16,5,13,12,11,14,5,12,7,12,5,13,8,7,14,9,9,9,12,1,9,11,10,7,12,9,13,7,5,9,4,13,9,9,15,8,11,11,11,1,12,6,18,8,15,9,14,6,16,9,6,11,11,7,1,9,20,7,8,4,6,5,7,9,17,9,12,11,11,9,15,9,10,10,12,16,13,8,5,8,9,8,9,7,14,6,12,18,9,6,4,5,11,15,16,18,9,7,10,10,12,6,13,10,10,10,17,23,15,14,5,14,12,9,7,12,11,14,7,14,9,1,3,16,12,18,9,10,16,6,16,12,7,14,4,13,8,10,12,7,17,6,10,9,9,7,8,14,2,6,14,9,12,8,8,1,12,12,16,17,5,10,4,4,11,5,7,7,11,14,3,8,9,2,7,12,5,9,17,9,13,8,7,10,7,8,16,7,19,6,6,16,7,13,5,7,15,5,5,8,8,7,8,8,15,12,6,8,8,17,14,13,11,6,15,9,9,12,2,14,9,9,21,7,12,9,11,12,5,11,7,10,9,6,4,9,12,16,5,4,16,10,9,6,10,13,13,11,3,8,10,11,6,11,15,9,7,6,8,11,16,13,9,7,11,4,13,13,9,12,7,9,7,17,3,9,9,9,7,5,9,7,6,5,14,11,11,5,8,4,9,7,16,12,9,8,11,14,19,15,3,16,12,9,12,14,11,11,15,8,12,15,10,1,17,13,15,17,8,6,10,15,6,8,10,16,12,2,9,12,19,9,4,19,10,12,12,12,5,7,21,12,6,3,6,18,5,12,10,12,10,10,5,10,3,8,9,10,6,4,12,8,8,7,8,6,16,11,11,7,8,6,11,5,7,7,2,10,16,14,6,4,8,14,5,9,11,12,7,20,6,13,7,10,16,5,18,2,6,10,2,5,15,6,7,6,16,10,3,8,10,9,8,15,7,14,8,6,1,6,18,10,12,16,10,8,12,8,9,13,7,15,10,8,11,17,18,14,11,5,15,3,15,12,14,7,6,7,13,8,6,11,2,10,9,12,17,13,10,9,5,11,14,16,14,3,18,11,13,5,12,15,9,12,7,5,5,8,6,4,16,13,8,14,10,10,11,10,10,7,15,5,8,12,14,16,15,13,10,9,10,12,1,1,12,6,15,7,10,9,15,11,15,8,7,11,9,8,10,7,3,13,16,13,18,15,5,6,9,12,15,11,9,5,4,13,10,7,8,18,11,9,6,16,8,10,10,12,3,14,14,14,7,14,16,9,15,13,12,8,17,12,3,8,2,16,7,13,8,3,15,5,16,12,10,13,14,10,8,7,9,14,10,11,11,5,13,10,9,14,5,5,11,10,10,15,9,11,4,16,10,6,11,6,13,13,14,5,10,13,10,17,11,11,9,8,9,18,7,5,10,12,2,8,17,6,7,12,11,16,5,14,9,9,13,9,5,2,6,8,7,14,5,5,9,15,13,4,15,11,12,9,5,12,10,13,11,14,16,19,9,7,14,5,13,9,11,10,12,15,12,10,14,4,11,8,11,9,1,13,3,9,12,9,3,9,12,18,11,15,13,11,12,10,4,6,14,13,13,10,10,11,12,12,12,2,14,12,12,6,11,9,15,13,6,5,13,14,9,7,5,14,6,12,12,11,7,13,9,12,10,7,8,12,6,11,12,10,18,8,11,10,7,16,16,9,16,4,11,14,5,15,4,10,17,4,14,11,10,15,4,15,10,11,7,5,12,16,18,15,10,16,15,10,8,8,6,6,10,11,8,6,16,12,16,12,18,8,4,11,13,10,5,15,16,2,8,6,10,11,13,16,11,13,11,14,9,8,10,12,8,4,15,11,2,6,4,9,4,14,13,6,6,10,6,8,8,5,10,7,4,6,5,16,12,12,17,10,7,6,7,8,3,5,14,5,5,7,9,9,6,10,6,9,11,13,13,10,13,20,9,9,16,9,10,14,15,8,12,8,11,12,6,11,7,10,11,7,3,6,10,10,7,11,9,6,6,11,6,14,23,9,11,3,6,15,3,14,5,9,8,8,9,9,11,11,8,15,14,5,8,8,14,15,17,7,5,16,9,13,10,2,13,14,5,11,12,11,5,12,9,8,7,12,11,13,8,6,7,7,9,10,5,13,18,11,10,12,11,13,14,8,6,11,12,10,11,11,9,5,8,7,13,9,7,9,10,7,12,15,14,13,5,12,9,9,8,10,12,18,21,16,10,13,12,9,6,10,9,14,8,5,14,7,3,11,9,10,8,11,11,10,10,10,10,7,7,14,9,16,13,10,14,3,8,11,9,15,19,4,6,13,12,2,9,12,15,12,21,12,8,8,7,15,9,9,8,12,4,8,10,10,9,9,13,5,12,14,8,11,17,9,7,8,5,11,11,7,17,8,13,11,11,16,5,5,13,8,15,10,13,8,12,4,14,14,6,4,10,8,5,23,12,15,6,2,13,10,10,7,13,9,12,2,12,13,11,13,15,22,8,22,6,13,13,11,14,3,12,8,6,13,9,10,12,6,11,10,13,7,13,16,10,10,9,9,7,11,7,10,11,11,15,7,14,10,9,10,9,10,7,6,7,12,11,3,15,13,10,14,17,16,18,5,15,10,17,15,13,3,3,10,15,5,8,13,11,16,12,8,13,11,8,16,11,14,9,13,7,10,9,5,13,15,16,6,17,8,9,8,13,10,13,7,10,15,17,12,9,5,21,9,13,6,12,12,11,11,8,13,5,15,11,9,2,10,13,6,3,15,12,7,5,10,16,4,5,16,14,15,12,12,6,8,7,10,11,10,11,9,12,5,10,11,8,8,11,2,4,6,13,8,13,6,9,11,5,5,9,6,10,6,6,14,16,15,11,9,19,9,8,17,19,8,6,7,6,10,9,6,10,8,8,8,14,10,8,12,15,16,15,6,12,17,14,15,12,15,13,17,8,16,6,12,11,10,12,8,16,2,12,13,10,18,6,15,6,12,9,4,10,1,9,5,13,9,9,6,19,8,12,13,13,12,12,14,11,16,9,12,9,15,12,14,7,12,18,6,12,10,14,14,5,3,6,1,17,15,15,14,15,10,7,5,6,14,14,15,15,16,10,22,8,9,13,7,10,14,12,5,17,14,5,14,9,3,13,11,8,12,10,5,10,10,10,12,3,8,2,10,9,9,5,11,11,11,9,10,9,8,10,11,3,7,12,9,5,8,18,7,12,8,4,8,10,14,6,10,7,13,13,13,7,11,6,8,15,3,10,7,9,12,3,8,12,10,10,17,13,13,13,8,7,9,9,12,15,8,13,15,15,6,14,11,11,5,3,1,6,3,9,4,5,9,12,1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3,2,8,7,6,1,7,12,9,14,2,6,9,9,8,6,11,11,5,7,12,9,8,11,8,11,10,13,10,8,11,7,12,14,8,9,19,5,4,4,13,10,13,15,11,16,14,13,11,7,7,7,21,10,9,11,12,10,7,14,10,13,9,13,10,15,9,8,12,16,15,17,11,1,13,9,9,5,10,15,7,14,5,12,7,11,5,10,4,13,16,7,14,7,13,11,7,7,12,7,11,7,13,9,7,5,9,12,12,13,13,4,11,14,15,10,4,7,13,6,8,13,8,13,9,11,15,13,8,13,7,18,3,2,17,5,11,11,3,8,8,10,11,6,7,9,8,8,12,5,15,14,9,5,6,5,4,12,10,9,11,12,11,9,7,18,8,10,15,11,8,14,9,10,6,10,12,12,6,11,8,4,9,11,8,5,5,8,16,13,15,7,11,7,12,10,6,10,7,14,13,9,6,13,12,8,10,7,5,10,16,8,12,8,9,10,4,7,11,7,9,12,8,8,12,9,15,9,10,11,7,13,9,5,14,17,10,14,9,13,5,11,15,9,13,10,12,14,17,11,13,12,11,17,6,8,16,8,13,9,13,17,13,11,10,17,6,3,6,10,5,7,8,2,12,14,8,9,11,5,8,16,11,13,7,16,4,18,10,17,12,8,6,14,14,13,12,16,1,11,12,8,3,3,5,10,10,7,8,6,10,4,5,15,9,15,1,11,12,9,15,9,14,12,11,15,14,6,13,12,14,11,12,8,6,12,11,3,8,6,7,13,14,6,14,6,16,15,4,5,13,6,10,14,11,8,9,2,7,7,11,8,9,10,9,6,15,5,4,10,11,10,8,11,14,15,10,13,14,7,16,10,10,10,17,13,21,17,14,16,10,8,10,16,17,10,13,6,11,5,9,9,11,11,14,9,9,9,13,14,16,13,15,15,8,19,8,9,5,6,11,9,5,17,8,5,14,7,19,8,10,13,11,12,11,15,6,10,5,10,15,18,12,9,17,14,4,3,9,12,6,7,13,6,8,13,11,12,14,12,14,10,10,10,6,15,12,8,8,8,8,8,10,13,8,9,21,9,11,15,14,10,12,5,15,15,7,14,9,8,10,8,5,6,4,10,11,8,13,12,11,13,14,1,6,5,7,7,13,8,8,14,14,13,13,12,4,11,11,18,10,10,8,11,12,15,7,6,7,3,17,10,7,12,11,13,11,13,18,11,13,2,9,11,3,7,14,12,10,4,15,9,3,10,12,13,8,6,8,6,7,13,9,4,7,8,7,9,7,10,12,10,7,7,3,6,12,9,13,6,1,6,22,11,12,12,3,2,13,13,10,6,11,7,3,10,3,12,9,10,15,9,11,12,9,4,21,16,11,4,13,6,12,13,8,9,3,2,14,1,9,3,13,9,9,13,13,12,10,9,8,15,10,6,15,4,9,15,11,18,7,6,12,8,9,11,11,9,17,14,5,12,6,8,4,2,6,11,6,6,7,15,3,8,8,13,3,13,15,10,10,7,14,17,9,10,13,10,6,8,15,6,9,11,6,12,18,10,1,16,9,10,15,8,7,12,17,8,10,1,11,13,9,9,9,6,15,13,12,10,10,7,11,10,9,10,13,13,9,19,14,9,7,13,11,9,13,5,5,8,9,6,11,8,6,8,6,20,12,18,11,6,11,5,8,6,5,14,6,16,6,13,13,7,12,15,4,10,19,10,13,9,8,16,11,4,6,13,8,10,5,8,11,10,15,14,10,6,21,14,12,14,7,6,5,9,10,15,18,10,8,9,4,11,10,3,10,8,12,1,17,9,7,12,9,14,5,9,4,10,7,14,10,13,11,11,12,11,15,1,8,10,16,7,3,8,3,10,10,8,6,20,11,12,9,7,12,10,12,13,6,7,11,8,17,2,8,18,14,10,10,6,12,4,3,9,7,12,7,9,7,13,3,9,11,9,9,11,7,10,21,12,11,10,10,9,10,4,12,13,5,9,7,12,15,5,11,1,11,12,1,9,14,8,11,12,9,13,7,7,5,8,8,10,10,5,12,17,14,13,15,8,11,3,9,5,9,4,10,2,11,5,18,10,14,8,6,6,11,12,13,10,14,14,9,5,13,12,6,8,13,9,11,14,8,9,9,18,2,12,10,13,9,13,9,8,7,14,13,11,7,7,6,10,9,12,21,13,11,14,17,7,5,8,7,8,12,10,9,18,10,14,11,12,1,6,9,8,6,8,14,14,5,10,5,8,8,2,14,8,5,6,12,9,7,13,8,11,9,12,9,11,10,2,13,17,13,8,15,12,8,5,12,12,11,6,8,10,7,10,10,12,10,7,11,15,10,7,8,13,18,8,20,15,14,10,7,11,16,13,9,9,8,12,14,15,14,13,13,10,9,15,9,13,11,19,9,10,9,15,8,3,9,7,13,16,13,6,9,10,6,15,11,3,12,7,9,5,1,15,5,8,5,4,13,10,5,8,5,11,3,9,16,12,7,8,14,2,15,10,13,12,18,16,12,16,12,17,13,9,9,9,4,14,4,5,13,6,16,13,7,13,8,7,15,1,12,12,8,10,19,4,15,7,16,6,3,7,15,13,7,15,13,12,16,5,10,10,9,16,10,9,9,14,8,10,12,11,8,7,4,9,6,13,10,16,12,11,10,8,8,11,7,11,12,14,14,8,10,9,13,7,19,10,15,12,12,14,10,12,15,6,14,15,17,6,7,14,10,2,14,8,13,18,12,8,15,8,14,7,11,16,14,14,13,5,14,13,9,15,7,16,4,4,13,16,14,11,10,5,13,13,2,10,13,2,5,4,18,11,9,14,8,10,15,9,6,10,6,6,15,9,9,12,4,15,6,11,7,6,12,8,9,12,13,8,17,8,13,7,10,8,5,19,11,15,13,6,5,9,2,13,5,11,7,8,11,3,8,10,9,7,15,6,9,17,11,13,12,6,5,6,10,15,9,13,9,5,9,12,14,12,7,13,5,5,16,9,12,12,13,5,10,11,7,11,8,10,11,9,2,12,4,13,8,14,5,10,13,6,15,9,13,10,20,6,6,14,7,4,8,11,13,11,16,5,11,11,9,6,10,12,7,7,4,15,15,6,10,2,12,8,13,10,6,8,7,7,9,15,7,10,1,13,12,8,13,8,17,5,16,16,13,12,5,11,14,11,9,11,17,12, diff --git a/test/rna_paf.sam.exp b/test/rna_paf.sam.exp index 6271d2c..4bbdc7f 100644 --- a/test/rna_paf.sam.exp +++ b/test/rna_paf.sam.exp @@ -158,5 +158,5 @@ @SQ SN:R1_43_2 LN:2907 @SQ SN:R1_73_1 LN:1914 @SQ SN:R1_73_2 LN:2865 -@PG ID:squigulator PN:squigulator VN:0.2.0-dirty +@PG ID:squigulator PN:squigulator VN:0.2.1 S1_1!R1_92_1!0!1637!+ 0 R1_92_1 1 255 1637M * 0 0 AAGGGGGAAGGGGGACTGGCGCGCGGCAAACCGGGGCGGCGACGAGGCCATTGACGCTCATTTCCTTCCTTTTGCCTCGGCGCCCCACCCAACCCATACACCCCCCCTCAGCGACCGCGGCTTCCGTTCTTGCAAAGGCCTATTCCAGGAGGTACCCATACCACAGCCAGTCCAGCACAACGAAACGGAGAGACCAAAGGGATGAGGAAAAGTGAGATAAATTCAGTCGACGGTTATTGAAAGAGAAAATCGAACGACAGATCCACATGATGGCTAACACTTATCCAACTCAGAAAGTGAGTGTAAAGAGGGCAACGGCGAAGGGTTAGAATGAACAACATGCCAGAAAGATTAAGAATGCGTAGAACTTGAATCGAGCGTATCTAAAGTAGAATACTTCGAAACTAGCGACTTAGGTGTTTGAGTACGCGAGTCTACAATAGAAGCAGCATGCGTTCCTGTTGGTAAGGGAGCTGGATGCTGATTCTGATGACTTTCGACTCCCCGGGTCGAGTTGTTTAAGGGAACTCGAGTACCCAGATAAGGCCAGAATGTTTAACTCTGAAGCTCTCGTCTGCTAAATAGCAATTGCGTCGCACAGTTTCGCAAATAACATATAAATCGACGGCTGGATCTCGTAGCACCAAGGTGCGATATCATCAATGCTAACCTTAATTAGCTAAGAAAGAAGTGCAACAATCTCAGAGCTTTCTTTTTAGACACCCGAACCCGAACGTTTGTTTACCCTCAGCCTCGTGCCAGGCCTGCTCATCAATACTCCTAGATTCAGACAGGAATACAACGGTGGACCGAATATCGGTTAGGCTTGTCTGATTGTTTCTTTAGACCACTAATGGTAAGAGTCCAAAAATATAAAAATAATTTCCTGTTCGGAGTGAAAAGTAAATAGAGAAAGCTATGGAATGAAGAATTGAGTGAAACAGTCGAAACTGAGAAGGAACGGGATGAAGAAGAGTGAGCAATGATGAAGCAACTGGGGACAACGAGGAATGGTTTAGTACATCTGCCCCCTCGTGAAGCCGGGACGTCACAGGAGAAGATGTTCGTGCATAAGAAGGAATATTACAATATAATGGTAGGCGGGCTAGAAGTAATAACAAATTGTGGCTAAACCTCGGGCTAACCGGAACTTCCTACGTAAAAGGAAAAGTGAACAAGGAAAAATTAATGCAAATAAATTACGGACTTGGCGCAGTAAAAAAACAGGATATCAATCCAAAGAAATCGAACCTGTCGATCGACCAGAGGGATTTGTGCCATAAGAAATAGTAGCGAGAAAAAGTACAACGGAGAAAGAGAAAGGCAAACTACCGCAGTGACCGCGAAGCAGACTAAGGCGGGGATTAACTAGCTCTGAAGATCACCATGGGCTATAGCCTCAGAAATCGGGAAACGGGGAAGAAAAGAAGAATTAGCAAGACTACCCCCAGACCAGACCGGTAATTCGGCTTCGTGGCTTTGACCGCGACATCGGTACAGGAAGGCCAGGGGGGGTGATGGGTGGGGGGGAGCGTGCACGAGCGGAAGGAAATATCTTATTAGCCACTAACGGTTGGTTATTGCTATGCCCCTTTCCGAGAAATGTTCGCGAAGTTGAGTAGCTTAGCTGGTCCAGT * si:Z:0,70084,1633,0 ss:Z:38,42,43,45,44,43,40,40,44,44,41,45,42,45,45,38,37,41,43,43,49,47,46,37,39,46,40,48,49,45,43,44,41,44,41,43,41,42,42,47,41,41,46,41,42,45,44,46,42,40,45,45,43,38,47,44,43,38,42,44,42,45,35,38,40,40,41,39,43,44,42,41,49,43,47,39,44,41,43,41,41,43,46,40,43,42,43,41,45,43,40,49,41,45,39,43,39,51,41,41,48,43,43,45,47,37,46,41,44,43,45,45,44,47,40,42,47,46,43,42,44,44,40,45,45,46,45,38,49,42,47,45,48,44,47,41,44,38,40,41,44,41,42,43,48,38,38,44,39,43,40,41,42,41,44,47,43,43,43,37,41,42,40,47,43,47,39,43,41,44,41,43,43,42,44,37,41,42,43,43,43,46,45,46,46,41,41,48,41,39,41,42,36,44,41,45,35,45,42,41,46,45,44,46,41,49,43,42,45,41,43,41,42,40,47,40,43,39,42,48,46,42,42,41,44,42,42,46,42,45,45,40,46,46,46,42,44,37,44,43,44,42,37,45,41,44,42,42,43,49,40,46,44,40,42,41,40,39,42,44,45,37,46,41,42,42,52,41,42,39,42,44,42,44,37,44,41,48,42,40,40,43,42,44,43,48,46,46,42,44,43,36,44,41,41,40,44,45,44,44,39,40,48,44,46,45,41,39,40,50,44,39,42,43,49,40,45,42,38,45,44,47,48,44,47,39,44,37,42,44,42,45,44,44,44,44,44,40,48,39,49,43,42,46,38,46,41,43,47,47,44,45,40,41,47,43,47,41,42,44,41,42,43,48,45,38,41,41,37,41,43,42,47,43,47,45,44,43,45,38,45,43,43,44,42,38,45,48,43,35,42,44,48,47,40,42,40,43,46,49,42,40,50,42,44,44,39,37,42,46,41,43,40,44,40,42,38,43,46,43,42,45,42,40,42,45,39,41,47,40,46,46,40,43,45,41,39,45,47,36,41,43,39,43,44,43,49,42,43,41,39,42,44,43,39,40,42,43,40,38,42,46,45,48,41,47,43,44,44,45,43,43,47,39,42,37,46,40,41,42,48,44,44,44,36,39,44,40,44,40,40,44,44,41,43,43,40,39,40,44,44,41,42,46,51,43,42,39,37,45,45,46,41,44,48,45,45,48,43,42,46,46,47,45,43,40,41,40,43,36,37,42,45,41,46,44,37,45,40,44,46,49,45,44,36,42,39,44,45,39,43,44,43,45,48,41,46,41,45,42,40,48,38,44,42,45,49,45,45,37,41,41,44,46,41,40,46,36,44,47,46,37,42,39,40,49,46,42,44,44,45,45,42,44,38,38,41,46,48,41,48,45,41,42,45,38,44,36,48,39,43,43,45,46,45,43,39,39,43,43,42,39,44,38,40,49,42,36,44,49,48,42,45,45,45,48,42,43,41,41,44,43,36,46,38,44,38,44,39,39,42,43,46,41,38,41,46,45,37,46,40,46,43,39,43,42,43,42,44,45,42,47,35,45,40,36,41,44,46,44,41,44,45,41,47,43,46,42,48,53,44,43,45,43,45,37,39,47,44,43,43,40,47,39,41,41,46,45,44,38,43,40,39,44,43,47,40,41,44,41,44,40,40,39,48,43,43,42,43,43,42,45,47,44,48,51,41,56,41,42,41,45,37,39,43,45,46,47,41,47,43,39,38,43,42,40,42,40,41,47,43,45,44,44,40,38,45,41,47,41,43,43,43,43,47,37,42,43,41,43,41,47,40,43,40,41,43,47,40,43,47,41,38,46,44,48,41,37,39,44,41,44,45,45,41,45,45,44,42,46,40,44,49,42,48,50,45,46,45,44,42,43,39,36,45,41,44,42,45,41,42,45,43,45,41,45,43,41,48,40,46,41,41,44,42,45,45,43,38,40,44,45,44,40,42,47,43,43,44,46,42,42,39,40,42,42,43,41,48,42,36,44,43,44,47,43,40,44,44,48,47,44,47,45,36,43,40,41,42,45,43,45,40,43,38,46,38,43,41,50,46,45,43,43,42,44,40,42,42,49,43,40,41,46,43,42,47,41,43,42,35,46,40,47,44,42,48,47,42,40,42,45,44,44,43,45,39,44,46,39,43,39,43,45,38,43,41,44,41,40,47,43,43,48,44,43,36,45,45,44,45,42,43,43,46,38,53,42,39,40,42,45,41,41,42,40,48,43,44,42,45,46,40,46,39,44,47,45,45,44,45,42,47,43,47,42,42,37,41,44,40,44,41,40,46,43,47,47,41,41,39,39,43,42,45,44,43,45,38,36,45,38,42,44,42,46,47,47,42,43,45,41,40,46,45,41,38,46,43,39,43,41,38,42,46,44,41,43,43,50,43,40,39,42,49,47,41,38,45,43,46,48,46,40,49,40,41,45,46,44,44,42,40,44,45,42,41,39,43,44,41,45,40,47,45,40,46,41,36,43,45,46,40,40,48,41,37,44,45,41,42,39,40,43,47,38,41,46,42,43,45,38,42,42,49,43,41,39,46,44,49,36,45,42,56,37,39,46,44,39,41,43,43,43,44,41,44,38,42,44,42,43,37,48,46,41,44,42,41,44,45,43,41,39,44,46,44,38,43,46,45,43,42,44,46,42,45,48,45,37,48,37,39,46,41,45,37,44,44,46,45,37,49,48,42,44,36,46,40,45,52,39,45,47,43,42,40,40,45,43,43,42,45,39,40,44,41,45,44,48,42,39,44,48,46,40,43,42,41,48,43,42,39,44,46,35,40,43,44,38,43,45,39,45,38,42,42,44,48,43,46,38,39,37,40,47,40,42,52,43,47,42,41,47,41,44,41,46,45,42,42,36,43,44,42,38,44,44,46,38,44,40,42,44,40,42,44,38,47,39,42,42,45,40,49,41,43,39,38,44,40,42,43,44,41,46,43,42,38,52,37,47,46,41,46,42,49,39,45,42,37,44,43,42,40,44,44,41,47,44,46,47,46,39,42,47,44,48,43,42,38,42,47,46,49,39,41,48,44,45,42,39,45,47,41,39,44,45,35,39,40,46,43,42,41,45,45,46,43,42,48,46,42,40,39,43,46,40,44,47,47,45,39,45,44,45,45,45,49,38,42,42,44,46,42,47,51,43,41,43,42,43,47,37,48,42,35,40,40,45,39,43,42,43,43,36,45,42,47,42,39,37,43,37,46,46,48,51,42,41,39,39,38,47,38,44,41,40,49,46,45,43,47,40,39,41,48,43,42,43,46,43,44,43,41,46,46,38,41,45,43,45,46,40,52,42,45,46,42,45,46,44,52,43,43,45,40,45,42,43,40,48,41,40,39,43,43,39,39,46,45,50,43,38,45,42,43,39,41,44,41,46,46,46,40,47,45,44,46,41,47,43,37,40,50,43,45,54,44,43,39,39,42,42,42,47,41,42,43,53,37,44,41,48,46,45,45,41,43,40,45,44,48,39,44,39,41,39,41,42,42,44,38,40,41,47,38,41,43,39,41,39,41,42,47,44,40,46,41,42,43,40,44,41,40,46,47,46,46,43,48,43,45,38,41,41,42,43,40,46,42,41,41,43,38,41,36,45,43,45,45,50,40,41,44,41,43,45,43,43,42,46,41,44,42,36,44,39,42,42,43,43,45,44,43,48,44,42,47,48,40,44,48,45,52,38,46,38,46,49,41,40,32, diff --git a/test/vupdate.sh b/test/vupdate.sh old mode 100644 new mode 100755