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KiloPlex

This is a class designed to be run as a protocol with RatCatcher. It converts raw data from Plexon (.plx) neurophysiology data files into MATLAB matrices, and provides an interface to the KiloSort2 cluster-cutting software.

Converting data

You can use the plx2mat function to convert from Plexon files to MATLAB matrices. The convert function scales matrices and converts to a KiloSort-readable format.

Spike sorting

Spike sorting is done through RatCatcher. Instantiate a RatCatcher object, and use the 'KiloPlex' protocol. See the setup script for an example.

Kilosort1

Looking for Kilosort 1? Look here: https://github.com/hasselmonians/KiloPlex/tree/KiloSort1