R-CMD-check

fix docs, penalty to integer, fix indexing for subsampling #79

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Job	Run time
macos-latest (release)	13m 16s
windows-latest (release)	32m 22s
ubuntu-latest (devel)	22m 51s
ubuntu-latest (release)	22m 15s
ubuntu-latest (oldrel-1)	21m 23s
	1h 52m 7s