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trackhub

Public UCSC track hub

This is an effort to collate publically available data in one unified trackhub. We welcome additions to the hub, or suggestions of data that might be included.

Track hub is available at http://hesselberthlab.github.io/trackhub/hub.txt

Currently the following track are available:

sacCer1

RNA

  • mRNA models (thanks to @speach)
  • mRNA-seq (Levin et al. (2010))

Replication

  • OriDB annotations
  • Replication timing (Yabuki and Raghuramana)
  • ChIP (Orc1 and Mcm2)
  • ssDNA accumulation in HU (Feng et al. 2006)