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  1. misc-scripts misc-scripts Public

    Miscellaneous small scripts

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  2. RaukR-2018-Notes RaukR-2018-Notes Public

    Notes and data from RaukR Course 2018

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  3. VAMPIR VAMPIR Public

    Tool for analysing reports for Antimicrobial resistance and virulence genes, plasmid types and multilocus sequence typing data

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  4. funtools funtools Public

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  5. vetmic2018 vetmic2018 Public

    Code accompanying Kaspersen et al. 2018 article in Veterinary Microbiology

  6. gyrA_mut_analysis gyrA_mut_analysis Public

    R script for mutation analysis of E. coli gyrA gene with .fasta files