fix kallisto path

hms-dbmi · Sep 11, 2019 · 579dff4 · 579dff4
1 parent 07c1cc8
commit 579dff4
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/R/build_kallisto_index.R b/R/build_kallisto_index.R
@@ -15,7 +15,7 @@
 #' # build kallist index for humans
 #' build_kallisto_index(indices_dir)
 #'
-build_kallisto_index <- function(species = 'homo_sapiens', release = '94', kallisto_path = '/home/ubuntu/miniconda2/bin/kallisto') {
+build_kallisto_index <- function(species = 'homo_sapiens', release = '94', kallisto_path = '/home/ubuntu/miniconda/bin/kallisto') {
 
   indices_dir <- system.file(package = 'drugseqr.data')
   indices_dir <- file.path(indices_dir, 'indices/kallisto')