From 7aa50ac6fd91bf5603be78de616a1c45819c86a9 Mon Sep 17 00:00:00 2001 From: Luke Sikina Date: Tue, 9 Jul 2024 15:39:30 -0400 Subject: [PATCH] [ALS-6006] - Update annotated VCFs description in Data Types info modal --- .../webapp/picsureui/requestSearch/dataTypesHelp.hbs | 11 ++++++----- 1 file changed, 6 insertions(+), 5 deletions(-) diff --git a/ui/src/main/webapp/picsureui/requestSearch/dataTypesHelp.hbs b/ui/src/main/webapp/picsureui/requestSearch/dataTypesHelp.hbs index 76a421b..704fa4b 100644 --- a/ui/src/main/webapp/picsureui/requestSearch/dataTypesHelp.hbs +++ b/ui/src/main/webapp/picsureui/requestSearch/dataTypesHelp.hbs @@ -4,11 +4,12 @@ Phenotypic Data: Clinical data, electronic health record information
  • - Annotated variant data for selected genes: The annotated variant data is sourced from the combined, - annotated VCF and represents the patient cohort selected by the applied genomic and clinical filters. The - original sample VCFs have been annotated using the Ensembl Variant Effect Predictor (VEP) to provide - additional annotations and determine the effects of each variant. Modifier variants have been removed. - To learn more visit the User Guide. + Annotated variant data for selected genes: The annotated genomic variants are sourced from the + combined and annotated VCF files, representing the variant set from patient cohort as defined by the + applied genomic and clinical filters in Query Builder. The original VCF files have been annotated using the + Ensembl Variant Effect Predictor (VEP), offering a set of variant-level annotations including the calculated + functional effect of each variant. To learn more, please visit + the User Guide.
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