R client library to run queries against a PIC-SURE High Performance Data Store (HPDS) resource.
Features
- Connect to a PIC-SURE resource through R using your personal access token
- Create and modify queries in R to generate cohorts at the variable level
- Run queries in R to pull aggregate counts and patient / participant level data
- Load queries generated in the PIC-SURE UI into an R environment
Dependencies
R6, httr, jsonlite, stringr, hash, purrr
Examples
See the Access-to-Data-using-PIC-SURE-API repository for example notebooks demonstrating how to use the R client libraries to run queries in PIC-SURE.
Functionality
See the package pdf documentation for more details regarding package functions and their uses.
Note: BioData Catalyst (BDC) users will find BDC specific functions prefaced by bdc..